Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NPIPA3F8WFD2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 OR2I1P-210ENST00000642037 4691 ntBASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 FTH1P14-201ENST00000482930 551 ntBASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 AC015910.1-201ENST00000579400 975 ntBASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 TMBIM7P-203ENST00000641617 1718 ntBASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
NPIPA3F8WFD2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 AC092933.1-201ENST00000393644 945 ntBASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 AC016694.1-201ENST00000434179 700 ntBASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 RPL7P3-201ENST00000441388 714 ntBASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 AC106760.1-201ENST00000508690 800 ntBASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NPIPA3F8WFD2 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms