Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GOLGA6L4A6NEF3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GOLGA6L4A6NEF3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
GOLGA6L4A6NEF3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GOLGA6L4A6NEF3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GOLGA6L4A6NEF3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GOLGA6L4A6NEF3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GOLGA6L4A6NEF3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC17.78■□□□□ 0.44
GOLGA6L4A6NEF3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GOLGA6L4A6NEF3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GOLGA6L4A6NEF3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 AC011467.4-201ENST00000594891 528 ntBASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GOLGA6L4A6NEF3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
GOLGA6L4A6NEF3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 GRK6P1-201ENST00000400595 1711 ntBASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 GHSR-202ENST00000427970 912 ntBASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 HTR5BP-201ENST00000430851 1154 ntBASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 MKNK2P1-201ENST00000437526 628 ntBASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 TARDBPP1-201ENST00000442013 1203 ntBASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 FDX1P1-201ENST00000449115 551 ntBASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 AP000845.1-201ENST00000581677 2131 ntBASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
GOLGA6L4A6NEF3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GOLGA6L4A6NEF3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms