Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC093726.1-201ENST00000608064 963 ntBASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC004790.1-201ENST00000612686 536 ntBASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC013726.1-201ENST00000563747 2285 ntBASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CICP23-201ENST00000605013 2741 ntBASIC12.39□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AZGP1P1-201ENST00000411909 902 ntBASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GIMAP3P-201ENST00000495150 836 ntBASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC092337.1-201ENST00000568699 1129 ntBASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC099568.2-201ENST00000609194 695 ntBASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AL008721.1-201ENST00000609964 604 ntBASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AC106881.1-201ENST00000605849 3329 ntBASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MROH4P-201ENST00000431302 1578 ntBASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TCRBV4S1A1TA0A5B7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms