Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGC5Q9Y5F6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGC5Q9Y5F6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGC5Q9Y5F6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHGC5Q9Y5F6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHGC5Q9Y5F6 AC010997.5-201ENST00000609182 354 ntBASIC25.42■■□□□ 1.66
PCDHGC5Q9Y5F6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
PCDHGC5Q9Y5F6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGC5Q9Y5F6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
PCDHGC5Q9Y5F6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.41■■□□□ 1.66
PCDHGC5Q9Y5F6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.41■■□□□ 1.66
PCDHGC5Q9Y5F6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDHGC5Q9Y5F6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGC5Q9Y5F6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.41■■□□□ 1.66
PCDHGC5Q9Y5F6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGC5Q9Y5F6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGC5Q9Y5F6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDHGC5Q9Y5F6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
PCDHGC5Q9Y5F6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDHGC5Q9Y5F6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.4■■□□□ 1.66
PCDHGC5Q9Y5F6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGC5Q9Y5F6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
PCDHGC5Q9Y5F6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGC5Q9Y5F6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGC5Q9Y5F6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGC5Q9Y5F6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGC5Q9Y5F6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGC5Q9Y5F6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGC5Q9Y5F6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGC5Q9Y5F6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGC5Q9Y5F6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDHGC5Q9Y5F6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGC5Q9Y5F6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.38■■□□□ 1.65
PCDHGC5Q9Y5F6 MIR4466-201ENST00000606121 54 ntBASIC25.38■■□□□ 1.65
PCDHGC5Q9Y5F6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGC5Q9Y5F6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC5Q9Y5F6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC5Q9Y5F6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
PCDHGC5Q9Y5F6 MIR3621-201ENST00000580529 85 ntBASIC25.37■■□□□ 1.65
PCDHGC5Q9Y5F6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC5Q9Y5F6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC5Q9Y5F6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
PCDHGC5Q9Y5F6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.37■■□□□ 1.65
PCDHGC5Q9Y5F6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC5Q9Y5F6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC5Q9Y5F6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 AC096631.2-201ENST00000436136 790 ntBASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC5Q9Y5F6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC5Q9Y5F6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC5Q9Y5F6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHGC5Q9Y5F6 MTDHP2-201ENST00000601468 714 ntBASIC25.35■■□□□ 1.65
PCDHGC5Q9Y5F6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC5Q9Y5F6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC5Q9Y5F6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC5Q9Y5F6 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 MIR6724-1-201ENST00000616420 92 ntBASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 MIR6724-2-201ENST00000616483 92 ntBASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 MIR6724-4-201ENST00000617390 92 ntBASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 MIR6724-3-201ENST00000622482 92 ntBASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC5Q9Y5F6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.33■■□□□ 1.65
PCDHGC5Q9Y5F6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDHGC5Q9Y5F6 AC097639.1-201ENST00000565519 1891 ntBASIC25.32■■□□□ 1.64
PCDHGC5Q9Y5F6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGC5Q9Y5F6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGC5Q9Y5F6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.32■■□□□ 1.64
PCDHGC5Q9Y5F6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
PCDHGC5Q9Y5F6 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDHGC5Q9Y5F6 AP003733.4-201ENST00000623785 1697 ntBASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms