Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHB13Q9Y5F0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHB13Q9Y5F0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHB13Q9Y5F0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHB13Q9Y5F0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 AC137630.3-201ENST00000607245 391 ntBASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDHB13Q9Y5F0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
PCDHB13Q9Y5F0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDHB13Q9Y5F0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHB13Q9Y5F0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHB13Q9Y5F0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHB13Q9Y5F0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHB13Q9Y5F0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHB13Q9Y5F0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHB13Q9Y5F0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.44■■□□□ 1.66
PCDHB13Q9Y5F0 AL161729.1-201ENST00000604104 1402 ntBASIC25.44■■□□□ 1.66
PCDHB13Q9Y5F0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PCDHB13Q9Y5F0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PCDHB13Q9Y5F0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
PCDHB13Q9Y5F0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB13Q9Y5F0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB13Q9Y5F0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
PCDHB13Q9Y5F0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB13Q9Y5F0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
PCDHB13Q9Y5F0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB13Q9Y5F0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHB13Q9Y5F0 AL022069.1-201ENST00000568025 1636 ntBASIC25.42■■□□□ 1.66
PCDHB13Q9Y5F0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.42■■□□□ 1.66
PCDHB13Q9Y5F0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.42■■□□□ 1.66
PCDHB13Q9Y5F0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB13Q9Y5F0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB13Q9Y5F0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
PCDHB13Q9Y5F0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB13Q9Y5F0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB13Q9Y5F0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHB13Q9Y5F0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
PCDHB13Q9Y5F0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB13Q9Y5F0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.41■■□□□ 1.66
PCDHB13Q9Y5F0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHB13Q9Y5F0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
PCDHB13Q9Y5F0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.41■■□□□ 1.66
PCDHB13Q9Y5F0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.4■■□□□ 1.66
PCDHB13Q9Y5F0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHB13Q9Y5F0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHB13Q9Y5F0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHB13Q9Y5F0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.39■■□□□ 1.66
PCDHB13Q9Y5F0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
PCDHB13Q9Y5F0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHB13Q9Y5F0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHB13Q9Y5F0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.39■■□□□ 1.65
PCDHB13Q9Y5F0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB13Q9Y5F0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB13Q9Y5F0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB13Q9Y5F0 BX664725.1-201ENST00000438252 379 ntBASIC25.38■■□□□ 1.65
PCDHB13Q9Y5F0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB13Q9Y5F0 AL451085.2-201ENST00000605085 799 ntBASIC25.38■■□□□ 1.65
PCDHB13Q9Y5F0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
PCDHB13Q9Y5F0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
PCDHB13Q9Y5F0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHB13Q9Y5F0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB13Q9Y5F0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDHB13Q9Y5F0 AC131274.2-201ENST00000580697 1507 ntBASIC25.37■■□□□ 1.65
PCDHB13Q9Y5F0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB13Q9Y5F0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB13Q9Y5F0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
PCDHB13Q9Y5F0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHB13Q9Y5F0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PCDHB13Q9Y5F0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHB13Q9Y5F0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms