Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 AC131274.2-201ENST00000580697 1507 ntBASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 AP003733.4-201ENST00000623785 1697 ntBASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.93■■□□□ 1.58
UBQLN1Q9UMX0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
UBQLN1Q9UMX0 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.92■■□□□ 1.58
UBQLN1Q9UMX0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
UBQLN1Q9UMX0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
UBQLN1Q9UMX0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
UBQLN1Q9UMX0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
UBQLN1Q9UMX0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
UBQLN1Q9UMX0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.91■■□□□ 1.58
UBQLN1Q9UMX0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
UBQLN1Q9UMX0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
UBQLN1Q9UMX0 AC142381.3-201ENST00000568208 1670 ntBASIC24.91■■□□□ 1.58
UBQLN1Q9UMX0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
UBQLN1Q9UMX0 HLA-L-211ENST00000482052 1765 ntBASIC24.9■■□□□ 1.58
UBQLN1Q9UMX0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.9■■□□□ 1.58
UBQLN1Q9UMX0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.9■■□□□ 1.58
UBQLN1Q9UMX0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.9■■□□□ 1.58
UBQLN1Q9UMX0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.9■■□□□ 1.58
UBQLN1Q9UMX0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
UBQLN1Q9UMX0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
UBQLN1Q9UMX0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
UBQLN1Q9UMX0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
UBQLN1Q9UMX0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
UBQLN1Q9UMX0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.89■■□□□ 1.58
UBQLN1Q9UMX0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.89■■□□□ 1.58
UBQLN1Q9UMX0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.89■■□□□ 1.58
UBQLN1Q9UMX0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
UBQLN1Q9UMX0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.89■■□□□ 1.58
UBQLN1Q9UMX0 AC020928.2-201ENST00000588717 2197 ntBASIC24.89■■□□□ 1.58
UBQLN1Q9UMX0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
UBQLN1Q9UMX0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.89■■□□□ 1.58
UBQLN1Q9UMX0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
UBQLN1Q9UMX0 AL022069.1-201ENST00000568025 1636 ntBASIC24.89■■□□□ 1.57
UBQLN1Q9UMX0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.89■■□□□ 1.57
UBQLN1Q9UMX0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
UBQLN1Q9UMX0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
UBQLN1Q9UMX0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
UBQLN1Q9UMX0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
UBQLN1Q9UMX0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.88■■□□□ 1.57
UBQLN1Q9UMX0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
UBQLN1Q9UMX0 AL117332.1-201ENST00000622628 974 ntBASIC24.88■■□□□ 1.57
UBQLN1Q9UMX0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
UBQLN1Q9UMX0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
UBQLN1Q9UMX0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
UBQLN1Q9UMX0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.88■■□□□ 1.57
UBQLN1Q9UMX0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
UBQLN1Q9UMX0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.87■■□□□ 1.57
UBQLN1Q9UMX0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
UBQLN1Q9UMX0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
UBQLN1Q9UMX0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.87■■□□□ 1.57
UBQLN1Q9UMX0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 MIR3621-201ENST00000580529 85 ntBASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
UBQLN1Q9UMX0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
UBQLN1Q9UMX0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
UBQLN1Q9UMX0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.85■■□□□ 1.57
UBQLN1Q9UMX0 AL356740.2-201ENST00000601559 647 ntBASIC24.85■■□□□ 1.57
UBQLN1Q9UMX0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.85■■□□□ 1.57
UBQLN1Q9UMX0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.85■■□□□ 1.57
UBQLN1Q9UMX0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
UBQLN1Q9UMX0 AC138932.3-201ENST00000567634 1902 ntBASIC24.84■■□□□ 1.57
UBQLN1Q9UMX0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
UBQLN1Q9UMX0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
UBQLN1Q9UMX0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
UBQLN1Q9UMX0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.84■■□□□ 1.57
UBQLN1Q9UMX0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
UBQLN1Q9UMX0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.84■■□□□ 1.57
UBQLN1Q9UMX0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
UBQLN1Q9UMX0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
UBQLN1Q9UMX0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.83■■□□□ 1.57
UBQLN1Q9UMX0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.83■■□□□ 1.57
UBQLN1Q9UMX0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.83■■□□□ 1.57
UBQLN1Q9UMX0 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.83■■□□□ 1.57
UBQLN1Q9UMX0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.83■■□□□ 1.57
UBQLN1Q9UMX0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.83■■□□□ 1.57
UBQLN1Q9UMX0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
UBQLN1Q9UMX0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
UBQLN1Q9UMX0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
UBQLN1Q9UMX0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
UBQLN1Q9UMX0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms