Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC139795.1-202ENST00000500444 432 ntBASIC21.75■■□□□ 1.07
NEUROD4Q9HD90 AC022616.5-201ENST00000518796 181 ntBASIC21.75■■□□□ 1.07
NEUROD4Q9HD90 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEUROD4Q9HD90 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
NEUROD4Q9HD90 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NEUROD4Q9HD90 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NEUROD4Q9HD90 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NEUROD4Q9HD90 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.74■■□□□ 1.07
NEUROD4Q9HD90 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 AC004987.1-201ENST00000428627 508 ntBASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 ATP5G2P3-201ENST00000429083 425 ntBASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NEUROD4Q9HD90 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.72■■□□□ 1.07
NEUROD4Q9HD90 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
NEUROD4Q9HD90 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NEUROD4Q9HD90 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NEUROD4Q9HD90 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NEUROD4Q9HD90 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEUROD4Q9HD90 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEUROD4Q9HD90 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEUROD4Q9HD90 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEUROD4Q9HD90 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NEUROD4Q9HD90 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.69■■□□□ 1.06
NEUROD4Q9HD90 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 RARRES2P1-201ENST00000474487 481 ntBASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 DUX4L18-201ENST00000553347 1267 ntBASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NEUROD4Q9HD90 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NEUROD4Q9HD90 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NEUROD4Q9HD90 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NEUROD4Q9HD90 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NEUROD4Q9HD90 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NEUROD4Q9HD90 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 AC074183.2-201ENST00000623112 922 ntBASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NEUROD4Q9HD90 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NEUROD4Q9HD90 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
NEUROD4Q9HD90 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEUROD4Q9HD90 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NEUROD4Q9HD90 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.65■■□□□ 1.06
NEUROD4Q9HD90 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms