Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
PCDH18Q9HCL0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDH18Q9HCL0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
PCDH18Q9HCL0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDH18Q9HCL0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDH18Q9HCL0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDH18Q9HCL0 AC103834.1-201ENST00000520383 144 ntBASIC23.97■■□□□ 1.43
PCDH18Q9HCL0 MIR4508-201ENST00000584178 70 ntBASIC23.97■■□□□ 1.43
PCDH18Q9HCL0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDH18Q9HCL0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH18Q9HCL0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH18Q9HCL0 KRT18P24-201ENST00000344739 1156 ntBASIC23.96■■□□□ 1.43
PCDH18Q9HCL0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH18Q9HCL0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PCDH18Q9HCL0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH18Q9HCL0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PCDH18Q9HCL0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.95■■□□□ 1.42
PCDH18Q9HCL0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PCDH18Q9HCL0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.95■■□□□ 1.42
PCDH18Q9HCL0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH18Q9HCL0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH18Q9HCL0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 ABCB10P4-201ENST00000566803 2184 ntBASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PCDH18Q9HCL0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH18Q9HCL0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PCDH18Q9HCL0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.93■■□□□ 1.42
PCDH18Q9HCL0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH18Q9HCL0 THA1P-201ENST00000590384 1145 ntBASIC23.93■■□□□ 1.42
PCDH18Q9HCL0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH18Q9HCL0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDH18Q9HCL0 KRT8P33-201ENST00000508125 1423 ntBASIC23.93■■□□□ 1.42
PCDH18Q9HCL0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH18Q9HCL0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PCDH18Q9HCL0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH18Q9HCL0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH18Q9HCL0 MIR4281-201ENST00000580852 62 ntBASIC23.92■■□□□ 1.42
PCDH18Q9HCL0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDH18Q9HCL0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDH18Q9HCL0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDH18Q9HCL0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
PCDH18Q9HCL0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.42
PCDH18Q9HCL0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDH18Q9HCL0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDH18Q9HCL0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PCDH18Q9HCL0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.89■■□□□ 1.41
PCDH18Q9HCL0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
PCDH18Q9HCL0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH18Q9HCL0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH18Q9HCL0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDH18Q9HCL0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.88■■□□□ 1.41
PCDH18Q9HCL0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH18Q9HCL0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDH18Q9HCL0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDH18Q9HCL0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 AF131216.4-201ENST00000638924 1588 ntBASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 AL161729.1-201ENST00000604104 1402 ntBASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 AC103724.3-201ENST00000564481 992 ntBASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 AC131274.2-201ENST00000580697 1507 ntBASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDH18Q9HCL0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH18Q9HCL0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDH18Q9HCL0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH18Q9HCL0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDH18Q9HCL0 YBX1P4-201ENST00000392794 808 ntBASIC23.86■■□□□ 1.41
PCDH18Q9HCL0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PCDH18Q9HCL0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH18Q9HCL0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDH18Q9HCL0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH18Q9HCL0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PCDH18Q9HCL0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDH18Q9HCL0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms