Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 LETM1P2-201ENST00000597330 2178 ntBASIC13.68□□□□□ -0.22
CYSTM1Q9H1C7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 AP004833.2-201ENST00000532228 1454 ntBASIC13.67□□□□□ -0.22
CYSTM1Q9H1C7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CYSTM1Q9H1C7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 AC010501.1-201ENST00000606270 1962 ntBASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CYSTM1Q9H1C7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CYSTM1Q9H1C7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CYSTM1Q9H1C7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CYSTM1Q9H1C7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.64□□□□□ -0.23
CYSTM1Q9H1C7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.64□□□□□ -0.23
CYSTM1Q9H1C7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CYSTM1Q9H1C7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CYSTM1Q9H1C7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 AC004812.2-201ENST00000611079 2094 ntBASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CYSTM1Q9H1C7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 AC087289.5-201ENST00000586076 3175 ntBASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CYSTM1Q9H1C7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CYSTM1Q9H1C7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CYSTM1Q9H1C7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms