Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
RTFDC1Q9BY42 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.46■■■□□ 2.15
RTFDC1Q9BY42 MIR6821-201ENST00000617625 74 ntBASIC28.46■■■□□ 2.15
RTFDC1Q9BY42 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
RTFDC1Q9BY42 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.45■■■□□ 2.15
RTFDC1Q9BY42 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
RTFDC1Q9BY42 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
RTFDC1Q9BY42 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
RTFDC1Q9BY42 AC091305.1-201ENST00000479476 895 ntBASIC28.45■■■□□ 2.14
RTFDC1Q9BY42 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.45■■■□□ 2.14
RTFDC1Q9BY42 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
RTFDC1Q9BY42 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
RTFDC1Q9BY42 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
RTFDC1Q9BY42 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
RTFDC1Q9BY42 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
RTFDC1Q9BY42 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
RTFDC1Q9BY42 AL121749.1-202ENST00000609313 2153 ntBASIC28.44■■■□□ 2.14
RTFDC1Q9BY42 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RTFDC1Q9BY42 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.43■■■□□ 2.14
RTFDC1Q9BY42 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RTFDC1Q9BY42 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
RTFDC1Q9BY42 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RTFDC1Q9BY42 AC097381.1-201ENST00000429019 1296 ntBASIC28.41■■■□□ 2.14
RTFDC1Q9BY42 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.41■■■□□ 2.14
RTFDC1Q9BY42 AC092171.4-201ENST00000609130 632 ntBASIC28.41■■■□□ 2.14
RTFDC1Q9BY42 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.41■■■□□ 2.14
RTFDC1Q9BY42 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RTFDC1Q9BY42 SYT6-210ENST00000641643 1587 ntBASIC28.41■■■□□ 2.14
RTFDC1Q9BY42 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.4■■■□□ 2.14
RTFDC1Q9BY42 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTFDC1Q9BY42 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.4■■■□□ 2.14
RTFDC1Q9BY42 MIR4767-201ENST00000582827 78 ntBASIC28.4■■■□□ 2.14
RTFDC1Q9BY42 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTFDC1Q9BY42 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
RTFDC1Q9BY42 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.4■■■□□ 2.14
RTFDC1Q9BY42 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
RTFDC1Q9BY42 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.39■■■□□ 2.14
RTFDC1Q9BY42 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
RTFDC1Q9BY42 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.39■■■□□ 2.14
RTFDC1Q9BY42 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.39■■■□□ 2.14
RTFDC1Q9BY42 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
RTFDC1Q9BY42 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.39■■■□□ 2.14
RTFDC1Q9BY42 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC28.39■■■□□ 2.14
RTFDC1Q9BY42 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.13
RTFDC1Q9BY42 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
RTFDC1Q9BY42 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
RTFDC1Q9BY42 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
RTFDC1Q9BY42 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
RTFDC1Q9BY42 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RTFDC1Q9BY42 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
RTFDC1Q9BY42 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.38■■■□□ 2.13
RTFDC1Q9BY42 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.38■■■□□ 2.13
RTFDC1Q9BY42 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RTFDC1Q9BY42 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RTFDC1Q9BY42 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RTFDC1Q9BY42 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RTFDC1Q9BY42 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 SERBP1P1-201ENST00000396021 1160 ntBASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 CA15P2-201ENST00000611168 834 ntBASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 AC010501.1-201ENST00000606270 1962 ntBASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 RASA4CP-201ENST00000424092 1398 ntBASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.36■■■□□ 2.13
RTFDC1Q9BY42 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RTFDC1Q9BY42 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RTFDC1Q9BY42 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.35■■■□□ 2.13
RTFDC1Q9BY42 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RTFDC1Q9BY42 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RTFDC1Q9BY42 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
RTFDC1Q9BY42 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RTFDC1Q9BY42 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.34■■■□□ 2.13
RTFDC1Q9BY42 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
RTFDC1Q9BY42 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RTFDC1Q9BY42 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RTFDC1Q9BY42 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.34■■■□□ 2.13
RTFDC1Q9BY42 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RTFDC1Q9BY42 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
RTFDC1Q9BY42 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RTFDC1Q9BY42 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.33■■■□□ 2.13
RTFDC1Q9BY42 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.33■■■□□ 2.13
RTFDC1Q9BY42 AC131274.2-201ENST00000580697 1507 ntBASIC28.33■■■□□ 2.13
RTFDC1Q9BY42 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.12
RTFDC1Q9BY42 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RTFDC1Q9BY42 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RTFDC1Q9BY42 PARL-206ENST00000435888 1098 ntTSL 5 BASIC28.32■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms