Protein–RNA interactions for Protein: Q9BRT8

CBWD1, COBW domain-containing protein 1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1Q9BRT8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
CBWD1Q9BRT8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CBWD1Q9BRT8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CBWD1Q9BRT8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CBWD1Q9BRT8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CBWD1Q9BRT8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CBWD1Q9BRT8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CBWD1Q9BRT8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CBWD1Q9BRT8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.27■■□□□ 1.64
CBWD1Q9BRT8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CBWD1Q9BRT8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CBWD1Q9BRT8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CBWD1Q9BRT8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.26■■□□□ 1.63
CBWD1Q9BRT8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.26■■□□□ 1.63
CBWD1Q9BRT8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.26■■□□□ 1.63
CBWD1Q9BRT8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CBWD1Q9BRT8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.26■■□□□ 1.63
CBWD1Q9BRT8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CBWD1Q9BRT8 AC131274.2-201ENST00000580697 1507 ntBASIC25.26■■□□□ 1.63
CBWD1Q9BRT8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CBWD1Q9BRT8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.26■■□□□ 1.63
CBWD1Q9BRT8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 AL035685.1-201ENST00000636663 812 ntBASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CBWD1Q9BRT8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CBWD1Q9BRT8 AC093323.1-202ENST00000635031 2045 ntBASIC25.24■■□□□ 1.63
CBWD1Q9BRT8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CBWD1Q9BRT8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CBWD1Q9BRT8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CBWD1Q9BRT8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.24■■□□□ 1.63
CBWD1Q9BRT8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CBWD1Q9BRT8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CBWD1Q9BRT8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CBWD1Q9BRT8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CBWD1Q9BRT8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CBWD1Q9BRT8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CBWD1Q9BRT8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.23■■□□□ 1.63
CBWD1Q9BRT8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
CBWD1Q9BRT8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CBWD1Q9BRT8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.23■■□□□ 1.63
CBWD1Q9BRT8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CBWD1Q9BRT8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
CBWD1Q9BRT8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 AC021242.3-201ENST00000607598 1377 ntBASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 BX664725.1-201ENST00000438252 379 ntBASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CBWD1Q9BRT8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CBWD1Q9BRT8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CBWD1Q9BRT8 AC004812.2-201ENST00000611079 2094 ntBASIC25.21■■□□□ 1.63
CBWD1Q9BRT8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.21■■□□□ 1.63
CBWD1Q9BRT8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.21■■□□□ 1.63
CBWD1Q9BRT8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CBWD1Q9BRT8 AC141586.4-201ENST00000624558 1573 ntBASIC25.2■■□□□ 1.62
CBWD1Q9BRT8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CBWD1Q9BRT8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CBWD1Q9BRT8 AC239859.2-201ENST00000444165 318 ntBASIC25.2■■□□□ 1.62
CBWD1Q9BRT8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.2■■□□□ 1.62
CBWD1Q9BRT8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.2■■□□□ 1.62
CBWD1Q9BRT8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CBWD1Q9BRT8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CBWD1Q9BRT8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CBWD1Q9BRT8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.19■■□□□ 1.62
CBWD1Q9BRT8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.19■■□□□ 1.62
CBWD1Q9BRT8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CBWD1Q9BRT8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
CBWD1Q9BRT8 Z92544.1-202ENST00000571933 1220 ntBASIC25.19■■□□□ 1.62
CBWD1Q9BRT8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CBWD1Q9BRT8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CBWD1Q9BRT8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
CBWD1Q9BRT8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CBWD1Q9BRT8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
CBWD1Q9BRT8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.18■■□□□ 1.62
CBWD1Q9BRT8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.18■■□□□ 1.62
CBWD1Q9BRT8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CBWD1Q9BRT8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.18■■□□□ 1.62
CBWD1Q9BRT8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CBWD1Q9BRT8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CBWD1Q9BRT8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CBWD1Q9BRT8 AL022069.1-201ENST00000568025 1636 ntBASIC25.17■■□□□ 1.62
CBWD1Q9BRT8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.17■■□□□ 1.62
CBWD1Q9BRT8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CBWD1Q9BRT8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.17■■□□□ 1.62
CBWD1Q9BRT8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CBWD1Q9BRT8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms