Protein–RNA interactions for Protein: Q9BRN9

TM2D3, TM2 domain-containing protein 3, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3Q9BRN9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM2D3Q9BRN9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM2D3Q9BRN9 SYT6-210ENST00000641643 1587 ntBASIC16.77■□□□□ 0.28
TM2D3Q9BRN9 AC010501.1-201ENST00000606270 1962 ntBASIC16.77■□□□□ 0.28
TM2D3Q9BRN9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM2D3Q9BRN9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.77■□□□□ 0.28
TM2D3Q9BRN9 AC091305.1-201ENST00000479476 895 ntBASIC16.77■□□□□ 0.28
TM2D3Q9BRN9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TM2D3Q9BRN9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TM2D3Q9BRN9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TM2D3Q9BRN9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TM2D3Q9BRN9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TM2D3Q9BRN9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.76■□□□□ 0.27
TM2D3Q9BRN9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.75■□□□□ 0.27
TM2D3Q9BRN9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM2D3Q9BRN9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM2D3Q9BRN9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.75■□□□□ 0.27
TM2D3Q9BRN9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM2D3Q9BRN9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM2D3Q9BRN9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM2D3Q9BRN9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TM2D3Q9BRN9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TM2D3Q9BRN9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM2D3Q9BRN9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TM2D3Q9BRN9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.74■□□□□ 0.27
TM2D3Q9BRN9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.74■□□□□ 0.27
TM2D3Q9BRN9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.74■□□□□ 0.27
TM2D3Q9BRN9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM2D3Q9BRN9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM2D3Q9BRN9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM2D3Q9BRN9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM2D3Q9BRN9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.74■□□□□ 0.27
TM2D3Q9BRN9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC16.74■□□□□ 0.27
TM2D3Q9BRN9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TM2D3Q9BRN9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM2D3Q9BRN9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM2D3Q9BRN9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.73■□□□□ 0.27
TM2D3Q9BRN9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM2D3Q9BRN9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.73■□□□□ 0.27
TM2D3Q9BRN9 MIR4767-201ENST00000582827 78 ntBASIC16.73■□□□□ 0.27
TM2D3Q9BRN9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TM2D3Q9BRN9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM2D3Q9BRN9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM2D3Q9BRN9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TM2D3Q9BRN9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.72■□□□□ 0.27
TM2D3Q9BRN9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM2D3Q9BRN9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
TM2D3Q9BRN9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.72■□□□□ 0.27
TM2D3Q9BRN9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TM2D3Q9BRN9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.72■□□□□ 0.27
TM2D3Q9BRN9 MIR6821-201ENST00000617625 74 ntBASIC16.72■□□□□ 0.27
TM2D3Q9BRN9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM2D3Q9BRN9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TM2D3Q9BRN9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.71■□□□□ 0.27
TM2D3Q9BRN9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TM2D3Q9BRN9 AL138724.1-201ENST00000606771 1088 ntBASIC16.71■□□□□ 0.27
TM2D3Q9BRN9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.71■□□□□ 0.27
TM2D3Q9BRN9 RASA4CP-201ENST00000424092 1398 ntBASIC16.71■□□□□ 0.27
TM2D3Q9BRN9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM2D3Q9BRN9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM2D3Q9BRN9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 AC131274.2-201ENST00000580697 1507 ntBASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 SERBP1P1-201ENST00000396021 1160 ntBASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 AC027682.1-201ENST00000562846 899 ntBASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 AC011298.3-201ENST00000615796 283 ntBASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TM2D3Q9BRN9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TM2D3Q9BRN9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM2D3Q9BRN9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TM2D3Q9BRN9 AC097381.1-201ENST00000429019 1296 ntBASIC16.69■□□□□ 0.26
TM2D3Q9BRN9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM2D3Q9BRN9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.69■□□□□ 0.26
TM2D3Q9BRN9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.69■□□□□ 0.26
TM2D3Q9BRN9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.69■□□□□ 0.26
TM2D3Q9BRN9 CA15P2-201ENST00000611168 834 ntBASIC16.69■□□□□ 0.26
TM2D3Q9BRN9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.69■□□□□ 0.26
TM2D3Q9BRN9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms