Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS1Q99742 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NPAS1Q99742 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS1Q99742 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.04■□□□□ 0.96
NPAS1Q99742 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPAS1Q99742 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NPAS1Q99742 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS1Q99742 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS1Q99742 AL035685.1-201ENST00000636663 812 ntBASIC21.03■□□□□ 0.96
NPAS1Q99742 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS1Q99742 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS1Q99742 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NPAS1Q99742 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPAS1Q99742 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.02■□□□□ 0.96
NPAS1Q99742 LINC01124-201ENST00000409786 2117 ntBASIC21.02■□□□□ 0.96
NPAS1Q99742 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS1Q99742 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS1Q99742 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.02■□□□□ 0.96
NPAS1Q99742 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS1Q99742 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS1Q99742 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NPAS1Q99742 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS1Q99742 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NPAS1Q99742 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS1Q99742 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS1Q99742 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPAS1Q99742 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NPAS1Q99742 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NPAS1Q99742 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS1Q99742 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NPAS1Q99742 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS1Q99742 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.01■□□□□ 0.95
NPAS1Q99742 AC137630.3-201ENST00000607245 391 ntBASIC21.01■□□□□ 0.95
NPAS1Q99742 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS1Q99742 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS1Q99742 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPAS1Q99742 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.01■□□□□ 0.95
NPAS1Q99742 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
NPAS1Q99742 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPAS1Q99742 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS1Q99742 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
NPAS1Q99742 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21■□□□□ 0.95
NPAS1Q99742 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPAS1Q99742 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21■□□□□ 0.95
NPAS1Q99742 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS1Q99742 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPAS1Q99742 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS1Q99742 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS1Q99742 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.99■□□□□ 0.95
NPAS1Q99742 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS1Q99742 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
NPAS1Q99742 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.99■□□□□ 0.95
NPAS1Q99742 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
NPAS1Q99742 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NPAS1Q99742 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS1Q99742 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS1Q99742 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS1Q99742 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPAS1Q99742 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.98■□□□□ 0.95
NPAS1Q99742 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.98■□□□□ 0.95
NPAS1Q99742 AC239859.2-201ENST00000444165 318 ntBASIC20.98■□□□□ 0.95
NPAS1Q99742 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS1Q99742 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.98■□□□□ 0.95
NPAS1Q99742 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS1Q99742 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPAS1Q99742 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.97■□□□□ 0.95
NPAS1Q99742 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS1Q99742 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS1Q99742 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS1Q99742 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS1Q99742 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.97■□□□□ 0.95
NPAS1Q99742 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS1Q99742 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS1Q99742 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAS1Q99742 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NPAS1Q99742 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS1Q99742 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NPAS1Q99742 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS1Q99742 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.96■□□□□ 0.95
NPAS1Q99742 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NPAS1Q99742 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.96■□□□□ 0.95
NPAS1Q99742 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS1Q99742 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.96■□□□□ 0.95
NPAS1Q99742 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS1Q99742 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
NPAS1Q99742 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS1Q99742 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAS1Q99742 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
NPAS1Q99742 AC131274.2-201ENST00000580697 1507 ntBASIC20.95■□□□□ 0.94
NPAS1Q99742 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS1Q99742 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.95■□□□□ 0.94
NPAS1Q99742 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.95■□□□□ 0.94
NPAS1Q99742 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS1Q99742 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS1Q99742 AC021242.3-201ENST00000607598 1377 ntBASIC20.95■□□□□ 0.94
NPAS1Q99742 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPAS1Q99742 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS1Q99742 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPAS1Q99742 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NPAS1Q99742 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms