Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCC1Q96S66 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCC1Q96S66 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
CLCC1Q96S66 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCC1Q96S66 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLCC1Q96S66 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLCC1Q96S66 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCC1Q96S66 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCC1Q96S66 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCC1Q96S66 RP9P-202ENST00000450133 1212 ntBASIC19.24■□□□□ 0.67
CLCC1Q96S66 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCC1Q96S66 AC093536.1-201ENST00000569153 554 ntBASIC19.24■□□□□ 0.67
CLCC1Q96S66 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCC1Q96S66 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCC1Q96S66 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCC1Q96S66 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCC1Q96S66 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCC1Q96S66 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLCC1Q96S66 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCC1Q96S66 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CLCC1Q96S66 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCC1Q96S66 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCC1Q96S66 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CLCC1Q96S66 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.23■□□□□ 0.67
CLCC1Q96S66 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLCC1Q96S66 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLCC1Q96S66 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCC1Q96S66 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.22■□□□□ 0.67
CLCC1Q96S66 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CLCC1Q96S66 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCC1Q96S66 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCC1Q96S66 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLCC1Q96S66 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCC1Q96S66 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCC1Q96S66 AC007029.1-201ENST00000604183 313 ntBASIC19.22■□□□□ 0.67
CLCC1Q96S66 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLCC1Q96S66 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLCC1Q96S66 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLCC1Q96S66 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CLCC1Q96S66 AP003733.4-201ENST00000623785 1697 ntBASIC19.21■□□□□ 0.67
CLCC1Q96S66 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCC1Q96S66 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCC1Q96S66 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCC1Q96S66 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCC1Q96S66 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLCC1Q96S66 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLCC1Q96S66 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLCC1Q96S66 RNF126P1-201ENST00000567452 1320 ntBASIC19.21■□□□□ 0.67
CLCC1Q96S66 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.21■□□□□ 0.67
CLCC1Q96S66 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCC1Q96S66 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCC1Q96S66 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CLCC1Q96S66 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLCC1Q96S66 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCC1Q96S66 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCC1Q96S66 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.2■□□□□ 0.66
CLCC1Q96S66 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.2■□□□□ 0.66
CLCC1Q96S66 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCC1Q96S66 AL024507.2-201ENST00000606070 2574 ntBASIC19.2■□□□□ 0.66
CLCC1Q96S66 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLCC1Q96S66 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCC1Q96S66 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCC1Q96S66 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCC1Q96S66 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCC1Q96S66 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLCC1Q96S66 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.19■□□□□ 0.66
CLCC1Q96S66 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.19■□□□□ 0.66
CLCC1Q96S66 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLCC1Q96S66 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 HSD17B1P1-201ENST00000590052 955 ntBASIC19.18■□□□□ 0.66
CLCC1Q96S66 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCC1Q96S66 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCC1Q96S66 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCC1Q96S66 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLCC1Q96S66 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCC1Q96S66 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCC1Q96S66 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCC1Q96S66 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCC1Q96S66 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCC1Q96S66 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCC1Q96S66 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms