Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
GAFA1Q96PS6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.27■□□□□ 0.67
GAFA1Q96PS6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GAFA1Q96PS6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.27■□□□□ 0.67
GAFA1Q96PS6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
GAFA1Q96PS6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GAFA1Q96PS6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.26■□□□□ 0.67
GAFA1Q96PS6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GAFA1Q96PS6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GAFA1Q96PS6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.26■□□□□ 0.67
GAFA1Q96PS6 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GAFA1Q96PS6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GAFA1Q96PS6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.26■□□□□ 0.67
GAFA1Q96PS6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GAFA1Q96PS6 AC131274.2-201ENST00000580697 1507 ntBASIC19.25■□□□□ 0.67
GAFA1Q96PS6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
GAFA1Q96PS6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAFA1Q96PS6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAFA1Q96PS6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAFA1Q96PS6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAFA1Q96PS6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GAFA1Q96PS6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.24■□□□□ 0.67
GAFA1Q96PS6 Z92544.1-202ENST00000571933 1220 ntBASIC19.24■□□□□ 0.67
GAFA1Q96PS6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.24■□□□□ 0.67
GAFA1Q96PS6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GAFA1Q96PS6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAFA1Q96PS6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GAFA1Q96PS6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GAFA1Q96PS6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GAFA1Q96PS6 AC021242.3-201ENST00000607598 1377 ntBASIC19.23■□□□□ 0.67
GAFA1Q96PS6 AL022069.1-201ENST00000568025 1636 ntBASIC19.23■□□□□ 0.67
GAFA1Q96PS6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GAFA1Q96PS6 AL035685.1-201ENST00000636663 812 ntBASIC19.23■□□□□ 0.67
GAFA1Q96PS6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GAFA1Q96PS6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GAFA1Q96PS6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAFA1Q96PS6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GAFA1Q96PS6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAFA1Q96PS6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAFA1Q96PS6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GAFA1Q96PS6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.21■□□□□ 0.67
GAFA1Q96PS6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GAFA1Q96PS6 AC239859.2-201ENST00000444165 318 ntBASIC19.21■□□□□ 0.67
GAFA1Q96PS6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.21■□□□□ 0.67
GAFA1Q96PS6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GAFA1Q96PS6 KRT125P-201ENST00000546827 989 ntBASIC19.21■□□□□ 0.67
GAFA1Q96PS6 AL161729.1-201ENST00000604104 1402 ntBASIC19.21■□□□□ 0.67
GAFA1Q96PS6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
GAFA1Q96PS6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.19■□□□□ 0.66
GAFA1Q96PS6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.19■□□□□ 0.66
GAFA1Q96PS6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.19■□□□□ 0.66
GAFA1Q96PS6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.19■□□□□ 0.66
GAFA1Q96PS6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.19■□□□□ 0.66
GAFA1Q96PS6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.19■□□□□ 0.66
GAFA1Q96PS6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.19■□□□□ 0.66
GAFA1Q96PS6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAFA1Q96PS6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GAFA1Q96PS6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.19■□□□□ 0.66
GAFA1Q96PS6 AC093323.1-202ENST00000635031 2045 ntBASIC19.18■□□□□ 0.66
GAFA1Q96PS6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAFA1Q96PS6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.18■□□□□ 0.66
GAFA1Q96PS6 MIR4787-201ENST00000607364 84 ntBASIC19.18■□□□□ 0.66
GAFA1Q96PS6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GAFA1Q96PS6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GAFA1Q96PS6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms