Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CASD1Q96PB1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.95■■□□□ 1.58
CASD1Q96PB1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.95■■□□□ 1.58
CASD1Q96PB1 AC024257.2-201ENST00000549699 147 ntBASIC24.95■■□□□ 1.58
CASD1Q96PB1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CASD1Q96PB1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CASD1Q96PB1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CASD1Q96PB1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CASD1Q96PB1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.94■■□□□ 1.58
CASD1Q96PB1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.94■■□□□ 1.58
CASD1Q96PB1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.94■■□□□ 1.58
CASD1Q96PB1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.94■■□□□ 1.58
CASD1Q96PB1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CASD1Q96PB1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CASD1Q96PB1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CASD1Q96PB1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.93■■□□□ 1.58
CASD1Q96PB1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CASD1Q96PB1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASD1Q96PB1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASD1Q96PB1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASD1Q96PB1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.92■■□□□ 1.58
CASD1Q96PB1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.92■■□□□ 1.58
CASD1Q96PB1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASD1Q96PB1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CASD1Q96PB1 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.92■■□□□ 1.58
CASD1Q96PB1 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.92■■□□□ 1.58
CASD1Q96PB1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CASD1Q96PB1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASD1Q96PB1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CASD1Q96PB1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CASD1Q96PB1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASD1Q96PB1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASD1Q96PB1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.9■■□□□ 1.58
CASD1Q96PB1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CASD1Q96PB1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CASD1Q96PB1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CASD1Q96PB1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
CASD1Q96PB1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASD1Q96PB1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CASD1Q96PB1 EDA-201ENST00000338901 1233 ntBASIC24.89■■□□□ 1.58
CASD1Q96PB1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CASD1Q96PB1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASD1Q96PB1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CASD1Q96PB1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CASD1Q96PB1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.89■■□□□ 1.57
CASD1Q96PB1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CASD1Q96PB1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CASD1Q96PB1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CASD1Q96PB1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
CASD1Q96PB1 DUSP8P4-201ENST00000399538 1761 ntBASIC24.88■■□□□ 1.57
CASD1Q96PB1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.88■■□□□ 1.57
CASD1Q96PB1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.88■■□□□ 1.57
CASD1Q96PB1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CASD1Q96PB1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.88■■□□□ 1.57
CASD1Q96PB1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.88■■□□□ 1.57
CASD1Q96PB1 MIR6089-201ENST00000616698 64 ntBASIC24.88■■□□□ 1.57
CASD1Q96PB1 AL355001.2-201ENST00000620617 1191 ntBASIC24.88■■□□□ 1.57
CASD1Q96PB1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CASD1Q96PB1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CASD1Q96PB1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CASD1Q96PB1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CASD1Q96PB1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CASD1Q96PB1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.87■■□□□ 1.57
CASD1Q96PB1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CASD1Q96PB1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CASD1Q96PB1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CASD1Q96PB1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CASD1Q96PB1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CASD1Q96PB1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.86■■□□□ 1.57
CASD1Q96PB1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.86■■□□□ 1.57
CASD1Q96PB1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.86■■□□□ 1.57
CASD1Q96PB1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CASD1Q96PB1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
CASD1Q96PB1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CASD1Q96PB1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CASD1Q96PB1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CASD1Q96PB1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.85■■□□□ 1.57
CASD1Q96PB1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.85■■□□□ 1.57
CASD1Q96PB1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CASD1Q96PB1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
CASD1Q96PB1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.85■■□□□ 1.57
CASD1Q96PB1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.85■■□□□ 1.57
CASD1Q96PB1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CASD1Q96PB1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
CASD1Q96PB1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
CASD1Q96PB1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CASD1Q96PB1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CASD1Q96PB1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CASD1Q96PB1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.84■■□□□ 1.57
CASD1Q96PB1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.84■■□□□ 1.57
CASD1Q96PB1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CASD1Q96PB1 DUX4L19-201ENST00000557448 1267 ntBASIC24.84■■□□□ 1.57
CASD1Q96PB1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.84■■□□□ 1.57
CASD1Q96PB1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.83■■□□□ 1.57
CASD1Q96PB1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CASD1Q96PB1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.83■■□□□ 1.57
CASD1Q96PB1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CASD1Q96PB1 AL136967.2-201ENST00000623968 743 ntBASIC24.83■■□□□ 1.57
CASD1Q96PB1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.83■■□□□ 1.57
CASD1Q96PB1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms