Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.07■■□□□ 1.44
ZSWIM3Q96MP5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZSWIM3Q96MP5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.06■■□□□ 1.44
ZSWIM3Q96MP5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.06■■□□□ 1.44
ZSWIM3Q96MP5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.06■■□□□ 1.44
ZSWIM3Q96MP5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.06■■□□□ 1.44
ZSWIM3Q96MP5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZSWIM3Q96MP5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
ZSWIM3Q96MP5 AC024257.2-201ENST00000549699 147 ntBASIC24.06■■□□□ 1.44
ZSWIM3Q96MP5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.06■■□□□ 1.44
ZSWIM3Q96MP5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ZSWIM3Q96MP5 AC135279.3-201ENST00000610945 1311 ntBASIC24.06■■□□□ 1.44
ZSWIM3Q96MP5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZSWIM3Q96MP5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
ZSWIM3Q96MP5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZSWIM3Q96MP5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.05■■□□□ 1.44
ZSWIM3Q96MP5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ZSWIM3Q96MP5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.05■■□□□ 1.44
ZSWIM3Q96MP5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 AC005703.6-201ENST00000623265 1329 ntBASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 AC131274.2-201ENST00000580697 1507 ntBASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZSWIM3Q96MP5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZSWIM3Q96MP5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.03■■□□□ 1.44
ZSWIM3Q96MP5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ZSWIM3Q96MP5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZSWIM3Q96MP5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZSWIM3Q96MP5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
ZSWIM3Q96MP5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZSWIM3Q96MP5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZSWIM3Q96MP5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
ZSWIM3Q96MP5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZSWIM3Q96MP5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.01■■□□□ 1.43
ZSWIM3Q96MP5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.01■■□□□ 1.43
ZSWIM3Q96MP5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZSWIM3Q96MP5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZSWIM3Q96MP5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZSWIM3Q96MP5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZSWIM3Q96MP5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
ZSWIM3Q96MP5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZSWIM3Q96MP5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZSWIM3Q96MP5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
ZSWIM3Q96MP5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24■■□□□ 1.43
ZSWIM3Q96MP5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24■■□□□ 1.43
ZSWIM3Q96MP5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
ZSWIM3Q96MP5 REST-206ENST00000612429 1376 ntTSL 5 BASIC24■■□□□ 1.43
ZSWIM3Q96MP5 REST-207ENST00000616975 1370 ntTSL 5 BASIC24■■□□□ 1.43
ZSWIM3Q96MP5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ZSWIM3Q96MP5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
ZSWIM3Q96MP5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
ZSWIM3Q96MP5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.99■■□□□ 1.43
ZSWIM3Q96MP5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
ZSWIM3Q96MP5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ZSWIM3Q96MP5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.98■■□□□ 1.43
ZSWIM3Q96MP5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.98■■□□□ 1.43
ZSWIM3Q96MP5 AL355001.2-201ENST00000620617 1191 ntBASIC23.98■■□□□ 1.43
ZSWIM3Q96MP5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.98■■□□□ 1.43
ZSWIM3Q96MP5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZSWIM3Q96MP5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZSWIM3Q96MP5 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.97■■□□□ 1.43
ZSWIM3Q96MP5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZSWIM3Q96MP5 EDA-201ENST00000338901 1233 ntBASIC23.97■■□□□ 1.43
ZSWIM3Q96MP5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZSWIM3Q96MP5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
ZSWIM3Q96MP5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.96■■□□□ 1.43
ZSWIM3Q96MP5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
ZSWIM3Q96MP5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms