Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.71■□□□□ 0.91
CPNE4Q96A23 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE4Q96A23 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE4Q96A23 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE4Q96A23 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.7■□□□□ 0.91
CPNE4Q96A23 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE4Q96A23 HLA-L-211ENST00000482052 1765 ntBASIC20.7■□□□□ 0.9
CPNE4Q96A23 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.7■□□□□ 0.9
CPNE4Q96A23 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.7■□□□□ 0.9
CPNE4Q96A23 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.7■□□□□ 0.9
CPNE4Q96A23 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CPNE4Q96A23 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.7■□□□□ 0.9
CPNE4Q96A23 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.7■□□□□ 0.9
CPNE4Q96A23 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.7■□□□□ 0.9
CPNE4Q96A23 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.7■□□□□ 0.9
CPNE4Q96A23 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CPNE4Q96A23 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CPNE4Q96A23 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE4Q96A23 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE4Q96A23 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.69■□□□□ 0.9
CPNE4Q96A23 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE4Q96A23 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.69■□□□□ 0.9
CPNE4Q96A23 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE4Q96A23 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.69■□□□□ 0.9
CPNE4Q96A23 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE4Q96A23 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CPNE4Q96A23 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE4Q96A23 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPNE4Q96A23 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.68■□□□□ 0.9
CPNE4Q96A23 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE4Q96A23 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE4Q96A23 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CPNE4Q96A23 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
CPNE4Q96A23 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE4Q96A23 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE4Q96A23 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPNE4Q96A23 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.67■□□□□ 0.9
CPNE4Q96A23 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.67■□□□□ 0.9
CPNE4Q96A23 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.67■□□□□ 0.9
CPNE4Q96A23 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.67■□□□□ 0.9
CPNE4Q96A23 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.67■□□□□ 0.9
CPNE4Q96A23 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.67■□□□□ 0.9
CPNE4Q96A23 AL022069.1-201ENST00000568025 1636 ntBASIC20.67■□□□□ 0.9
CPNE4Q96A23 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE4Q96A23 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE4Q96A23 TSPY9P-201ENST00000440215 945 ntBASIC20.66■□□□□ 0.9
CPNE4Q96A23 TSPY11P-201ENST00000442607 1045 ntBASIC20.66■□□□□ 0.9
CPNE4Q96A23 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 AL161729.1-201ENST00000604104 1402 ntBASIC20.66■□□□□ 0.9
CPNE4Q96A23 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPNE4Q96A23 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CPNE4Q96A23 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE4Q96A23 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE4Q96A23 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE4Q96A23 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE4Q96A23 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE4Q96A23 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.65■□□□□ 0.9
CPNE4Q96A23 MTDHP2-201ENST00000601468 714 ntBASIC20.65■□□□□ 0.9
CPNE4Q96A23 SNX5-217ENST00000606557 1087 ntBASIC20.65■□□□□ 0.9
CPNE4Q96A23 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE4Q96A23 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CPNE4Q96A23 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE4Q96A23 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CPNE4Q96A23 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPNE4Q96A23 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE4Q96A23 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.64■□□□□ 0.89
CPNE4Q96A23 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CPNE4Q96A23 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE4Q96A23 AC004448.1-201ENST00000458332 883 ntBASIC20.64■□□□□ 0.89
CPNE4Q96A23 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.64■□□□□ 0.89
CPNE4Q96A23 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.64■□□□□ 0.89
CPNE4Q96A23 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.64■□□□□ 0.89
CPNE4Q96A23 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE4Q96A23 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE4Q96A23 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE4Q96A23 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE4Q96A23 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CPNE4Q96A23 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE4Q96A23 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.63■□□□□ 0.89
CPNE4Q96A23 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE4Q96A23 UNC93B8-201ENST00000511903 705 ntBASIC20.63■□□□□ 0.89
CPNE4Q96A23 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.63■□□□□ 0.89
CPNE4Q96A23 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE4Q96A23 AC131274.2-201ENST00000580697 1507 ntBASIC20.63■□□□□ 0.89
CPNE4Q96A23 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE4Q96A23 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE4Q96A23 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE4Q96A23 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE4Q96A23 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE4Q96A23 KRT16P3-201ENST00000439127 1283 ntBASIC20.62■□□□□ 0.89
CPNE4Q96A23 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms