Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB1Q8WWH5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB1Q8WWH5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRUB1Q8WWH5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB1Q8WWH5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB1Q8WWH5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB1Q8WWH5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
TRUB1Q8WWH5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB1Q8WWH5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB1Q8WWH5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.11■□□□□ 0.97
TRUB1Q8WWH5 AC025884.2-201ENST00000553429 711 ntBASIC21.11■□□□□ 0.97
TRUB1Q8WWH5 MIR3960-201ENST00000583311 91 ntBASIC21.11■□□□□ 0.97
TRUB1Q8WWH5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB1Q8WWH5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB1Q8WWH5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRUB1Q8WWH5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRUB1Q8WWH5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB1Q8WWH5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB1Q8WWH5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.09■□□□□ 0.97
TRUB1Q8WWH5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB1Q8WWH5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB1Q8WWH5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.09■□□□□ 0.97
TRUB1Q8WWH5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.09■□□□□ 0.97
TRUB1Q8WWH5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.09■□□□□ 0.97
TRUB1Q8WWH5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB1Q8WWH5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRUB1Q8WWH5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRUB1Q8WWH5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRUB1Q8WWH5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRUB1Q8WWH5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.08■□□□□ 0.96
TRUB1Q8WWH5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRUB1Q8WWH5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRUB1Q8WWH5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.06■□□□□ 0.96
TRUB1Q8WWH5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRUB1Q8WWH5 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRUB1Q8WWH5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.06■□□□□ 0.96
TRUB1Q8WWH5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.06■□□□□ 0.96
TRUB1Q8WWH5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRUB1Q8WWH5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB1Q8WWH5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB1Q8WWH5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.04■□□□□ 0.96
TRUB1Q8WWH5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.04■□□□□ 0.96
TRUB1Q8WWH5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.04■□□□□ 0.96
TRUB1Q8WWH5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB1Q8WWH5 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRUB1Q8WWH5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
TRUB1Q8WWH5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB1Q8WWH5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB1Q8WWH5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB1Q8WWH5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.03■□□□□ 0.96
TRUB1Q8WWH5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
TRUB1Q8WWH5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.03■□□□□ 0.96
TRUB1Q8WWH5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB1Q8WWH5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB1Q8WWH5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRUB1Q8WWH5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 AL157400.5-201ENST00000507624 621 ntBASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRUB1Q8WWH5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms