Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF138Q8WVD3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF138Q8WVD3 LINC00543-201ENST00000567234 1845 ntBASIC21.08■□□□□ 0.97
RNF138Q8WVD3 AL022069.1-201ENST00000568025 1636 ntBASIC21.08■□□□□ 0.97
RNF138Q8WVD3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF138Q8WVD3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF138Q8WVD3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF138Q8WVD3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF138Q8WVD3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF138Q8WVD3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF138Q8WVD3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.08■□□□□ 0.97
RNF138Q8WVD3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF138Q8WVD3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF138Q8WVD3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.07■□□□□ 0.96
RNF138Q8WVD3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
RNF138Q8WVD3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF138Q8WVD3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF138Q8WVD3 MIR6722-201ENST00000617286 78 ntBASIC21.05■□□□□ 0.96
RNF138Q8WVD3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF138Q8WVD3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF138Q8WVD3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF138Q8WVD3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF138Q8WVD3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF138Q8WVD3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF138Q8WVD3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF138Q8WVD3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 UNC93B8-201ENST00000511903 705 ntBASIC21.04■□□□□ 0.96
RNF138Q8WVD3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF138Q8WVD3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF138Q8WVD3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF138Q8WVD3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF138Q8WVD3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF138Q8WVD3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF138Q8WVD3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF138Q8WVD3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF138Q8WVD3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RNF138Q8WVD3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF138Q8WVD3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF138Q8WVD3 AC135731.1-201ENST00000569415 2548 ntBASIC21.03■□□□□ 0.96
RNF138Q8WVD3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF138Q8WVD3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF138Q8WVD3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF138Q8WVD3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF138Q8WVD3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RNF138Q8WVD3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF138Q8WVD3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF138Q8WVD3 LINC01124-201ENST00000409786 2117 ntBASIC21.02■□□□□ 0.96
RNF138Q8WVD3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms