Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RPS4Y2Q8TD47 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
RPS4Y2Q8TD47 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.26■□□□□ 0.83
RPS4Y2Q8TD47 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4Y2Q8TD47 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4Y2Q8TD47 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4Y2Q8TD47 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4Y2Q8TD47 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
RPS4Y2Q8TD47 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.24■□□□□ 0.83
RPS4Y2Q8TD47 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RPS4Y2Q8TD47 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4Y2Q8TD47 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.24■□□□□ 0.83
RPS4Y2Q8TD47 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4Y2Q8TD47 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.23■□□□□ 0.83
RPS4Y2Q8TD47 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.23■□□□□ 0.83
RPS4Y2Q8TD47 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y2Q8TD47 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RPS4Y2Q8TD47 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y2Q8TD47 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4Y2Q8TD47 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y2Q8TD47 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RPS4Y2Q8TD47 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y2Q8TD47 HSD17B1P1-201ENST00000590052 955 ntBASIC20.22■□□□□ 0.83
RPS4Y2Q8TD47 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.22■□□□□ 0.83
RPS4Y2Q8TD47 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y2Q8TD47 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4Y2Q8TD47 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 ANOS2P-203ENST00000472227 1816 ntBASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 AC092068.2-201ENST00000590491 1708 ntBASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4Y2Q8TD47 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 AL117328.2-201ENST00000624617 1940 ntBASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 AC022413.1-201ENST00000624602 984 ntBASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 DUSP8P3-201ENST00000399571 1760 ntBASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4Y2Q8TD47 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPS4Y2Q8TD47 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 AL161729.1-201ENST00000604104 1402 ntBASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.18■□□□□ 0.82
RPS4Y2Q8TD47 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms