Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHKBP1Q8TBC3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SHKBP1Q8TBC3 AC096631.2-201ENST00000436136 790 ntBASIC24.35■■□□□ 1.49
SHKBP1Q8TBC3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.35■■□□□ 1.49
SHKBP1Q8TBC3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SHKBP1Q8TBC3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHKBP1Q8TBC3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
SHKBP1Q8TBC3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SHKBP1Q8TBC3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHKBP1Q8TBC3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHKBP1Q8TBC3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SHKBP1Q8TBC3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.34■■□□□ 1.49
SHKBP1Q8TBC3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.34■■□□□ 1.49
SHKBP1Q8TBC3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.34■■□□□ 1.49
SHKBP1Q8TBC3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SHKBP1Q8TBC3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SHKBP1Q8TBC3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SHKBP1Q8TBC3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.33■■□□□ 1.49
SHKBP1Q8TBC3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.33■■□□□ 1.48
SHKBP1Q8TBC3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
SHKBP1Q8TBC3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SHKBP1Q8TBC3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.32■■□□□ 1.48
SHKBP1Q8TBC3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.31■■□□□ 1.48
SHKBP1Q8TBC3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHKBP1Q8TBC3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SHKBP1Q8TBC3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SHKBP1Q8TBC3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.31■■□□□ 1.48
SHKBP1Q8TBC3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.31■■□□□ 1.48
SHKBP1Q8TBC3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.3■■□□□ 1.48
SHKBP1Q8TBC3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SHKBP1Q8TBC3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.3■■□□□ 1.48
SHKBP1Q8TBC3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHKBP1Q8TBC3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SHKBP1Q8TBC3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHKBP1Q8TBC3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.29■■□□□ 1.48
SHKBP1Q8TBC3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHKBP1Q8TBC3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SHKBP1Q8TBC3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
SHKBP1Q8TBC3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.29■■□□□ 1.48
SHKBP1Q8TBC3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SHKBP1Q8TBC3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHKBP1Q8TBC3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.28■■□□□ 1.48
SHKBP1Q8TBC3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SHKBP1Q8TBC3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHKBP1Q8TBC3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SHKBP1Q8TBC3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SHKBP1Q8TBC3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
SHKBP1Q8TBC3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SHKBP1Q8TBC3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.26■■□□□ 1.47
SHKBP1Q8TBC3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.26■■□□□ 1.47
SHKBP1Q8TBC3 AC005837.3-201ENST00000612163 286 ntBASIC24.26■■□□□ 1.47
SHKBP1Q8TBC3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SHKBP1Q8TBC3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
SHKBP1Q8TBC3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
SHKBP1Q8TBC3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SHKBP1Q8TBC3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.25■■□□□ 1.47
SHKBP1Q8TBC3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.25■■□□□ 1.47
SHKBP1Q8TBC3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SHKBP1Q8TBC3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.25■■□□□ 1.47
SHKBP1Q8TBC3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.25■■□□□ 1.47
SHKBP1Q8TBC3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.25■■□□□ 1.47
SHKBP1Q8TBC3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SHKBP1Q8TBC3 AC004448.1-201ENST00000458332 883 ntBASIC24.24■■□□□ 1.47
SHKBP1Q8TBC3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
SHKBP1Q8TBC3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.24■■□□□ 1.47
SHKBP1Q8TBC3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SHKBP1Q8TBC3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SHKBP1Q8TBC3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.23■■□□□ 1.47
SHKBP1Q8TBC3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.23■■□□□ 1.47
SHKBP1Q8TBC3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SHKBP1Q8TBC3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SHKBP1Q8TBC3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SHKBP1Q8TBC3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHKBP1Q8TBC3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
SHKBP1Q8TBC3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHKBP1Q8TBC3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHKBP1Q8TBC3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.22■■□□□ 1.47
SHKBP1Q8TBC3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.22■■□□□ 1.47
SHKBP1Q8TBC3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SHKBP1Q8TBC3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.22■■□□□ 1.47
SHKBP1Q8TBC3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SHKBP1Q8TBC3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SHKBP1Q8TBC3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SHKBP1Q8TBC3 AC133561.4-201ENST00000566112 224 ntBASIC24.21■■□□□ 1.47
SHKBP1Q8TBC3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.2■■□□□ 1.47
SHKBP1Q8TBC3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
SHKBP1Q8TBC3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
SHKBP1Q8TBC3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.2■■□□□ 1.46
SHKBP1Q8TBC3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.2■■□□□ 1.46
SHKBP1Q8TBC3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms