Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.72■■■□□ 2.19
RTL9Q8NET4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTL9Q8NET4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
RTL9Q8NET4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.71■■■□□ 2.19
RTL9Q8NET4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC28.71■■■□□ 2.19
RTL9Q8NET4 AC133561.4-201ENST00000566112 224 ntBASIC28.71■■■□□ 2.19
RTL9Q8NET4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC28.71■■■□□ 2.19
RTL9Q8NET4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.71■■■□□ 2.19
RTL9Q8NET4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC28.71■■■□□ 2.19
RTL9Q8NET4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
RTL9Q8NET4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.71■■■□□ 2.19
RTL9Q8NET4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
RTL9Q8NET4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
RTL9Q8NET4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
RTL9Q8NET4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RTL9Q8NET4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.69■■■□□ 2.18
RTL9Q8NET4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.69■■■□□ 2.18
RTL9Q8NET4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.69■■■□□ 2.18
RTL9Q8NET4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RTL9Q8NET4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
RTL9Q8NET4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC28.68■■■□□ 2.18
RTL9Q8NET4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.68■■■□□ 2.18
RTL9Q8NET4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
RTL9Q8NET4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
RTL9Q8NET4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.67■■■□□ 2.18
RTL9Q8NET4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RTL9Q8NET4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RTL9Q8NET4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.67■■■□□ 2.18
RTL9Q8NET4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.67■■■□□ 2.18
RTL9Q8NET4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RTL9Q8NET4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.67■■■□□ 2.18
RTL9Q8NET4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.66■■■□□ 2.18
RTL9Q8NET4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
RTL9Q8NET4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.66■■■□□ 2.18
RTL9Q8NET4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC28.66■■■□□ 2.18
RTL9Q8NET4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.66■■■□□ 2.18
RTL9Q8NET4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
RTL9Q8NET4 AC005703.6-201ENST00000623265 1329 ntBASIC28.66■■■□□ 2.18
RTL9Q8NET4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
RTL9Q8NET4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.65■■■□□ 2.18
RTL9Q8NET4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
RTL9Q8NET4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RTL9Q8NET4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
RTL9Q8NET4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
RTL9Q8NET4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
RTL9Q8NET4 ZNRF2P3-201ENST00000424200 374 ntBASIC28.63■■■□□ 2.17
RTL9Q8NET4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTL9Q8NET4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
RTL9Q8NET4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
RTL9Q8NET4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RTL9Q8NET4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
RTL9Q8NET4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RTL9Q8NET4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RTL9Q8NET4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RTL9Q8NET4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RTL9Q8NET4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.62■■■□□ 2.17
RTL9Q8NET4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RTL9Q8NET4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RTL9Q8NET4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.61■■■□□ 2.17
RTL9Q8NET4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.61■■■□□ 2.17
RTL9Q8NET4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RTL9Q8NET4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTL9Q8NET4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
RTL9Q8NET4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RTL9Q8NET4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTL9Q8NET4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RTL9Q8NET4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTL9Q8NET4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTL9Q8NET4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.61■■■□□ 2.17
RTL9Q8NET4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RTL9Q8NET4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
RTL9Q8NET4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RTL9Q8NET4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RTL9Q8NET4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.6■■■□□ 2.17
RTL9Q8NET4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.6■■■□□ 2.17
RTL9Q8NET4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.6■■■□□ 2.17
RTL9Q8NET4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
RTL9Q8NET4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
RTL9Q8NET4 AC106739.1-201ENST00000617035 715 ntBASIC28.6■■■□□ 2.17
RTL9Q8NET4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.6■■■□□ 2.17
RTL9Q8NET4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
RTL9Q8NET4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
RTL9Q8NET4 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.59■■■□□ 2.17
RTL9Q8NET4 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.59■■■□□ 2.17
RTL9Q8NET4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTL9Q8NET4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
RTL9Q8NET4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.59■■■□□ 2.17
RTL9Q8NET4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RTL9Q8NET4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
RTL9Q8NET4 SRD5A1P1-201ENST00000442297 786 ntBASIC28.58■■■□□ 2.17
RTL9Q8NET4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RTL9Q8NET4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.58■■■□□ 2.17
RTL9Q8NET4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.58■■■□□ 2.17
RTL9Q8NET4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.57■■■□□ 2.16
RTL9Q8NET4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
RTL9Q8NET4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
RTL9Q8NET4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
RTL9Q8NET4 AL022069.1-201ENST00000568025 1636 ntBASIC28.57■■■□□ 2.16
RTL9Q8NET4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
RTL9Q8NET4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 367.4 ms