Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RAB42Q8N4Z0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RAB42Q8N4Z0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.45■■□□□ 1.19
RAB42Q8N4Z0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.45■■□□□ 1.19
RAB42Q8N4Z0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 AL035685.1-201ENST00000636663 812 ntBASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 AL161729.1-201ENST00000604104 1402 ntBASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 AF131216.4-201ENST00000638924 1588 ntBASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
RAB42Q8N4Z0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RAB42Q8N4Z0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
RAB42Q8N4Z0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAB42Q8N4Z0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.44■■□□□ 1.18
RAB42Q8N4Z0 AL022069.1-201ENST00000568025 1636 ntBASIC22.44■■□□□ 1.18
RAB42Q8N4Z0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.44■■□□□ 1.18
RAB42Q8N4Z0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
RAB42Q8N4Z0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAB42Q8N4Z0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RAB42Q8N4Z0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAB42Q8N4Z0 AC021242.3-201ENST00000607598 1377 ntBASIC22.43■■□□□ 1.18
RAB42Q8N4Z0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RAB42Q8N4Z0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAB42Q8N4Z0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RAB42Q8N4Z0 AC239859.2-201ENST00000444165 318 ntBASIC22.43■■□□□ 1.18
RAB42Q8N4Z0 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAB42Q8N4Z0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.42■■□□□ 1.18
RAB42Q8N4Z0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RAB42Q8N4Z0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
RAB42Q8N4Z0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAB42Q8N4Z0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAB42Q8N4Z0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 AC141586.4-201ENST00000624558 1573 ntBASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAB42Q8N4Z0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RAB42Q8N4Z0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RAB42Q8N4Z0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB42Q8N4Z0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB42Q8N4Z0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB42Q8N4Z0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB42Q8N4Z0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB42Q8N4Z0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RAB42Q8N4Z0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
RAB42Q8N4Z0 MIR4787-201ENST00000607364 84 ntBASIC22.39■■□□□ 1.17
RAB42Q8N4Z0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RAB42Q8N4Z0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RAB42Q8N4Z0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.38■■□□□ 1.17
RAB42Q8N4Z0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.38■■□□□ 1.17
RAB42Q8N4Z0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RAB42Q8N4Z0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.38■■□□□ 1.17
RAB42Q8N4Z0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAB42Q8N4Z0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RAB42Q8N4Z0 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.37■■□□□ 1.17
RAB42Q8N4Z0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.37■■□□□ 1.17
RAB42Q8N4Z0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.37■■□□□ 1.17
RAB42Q8N4Z0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAB42Q8N4Z0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RAB42Q8N4Z0 AL139125.2-201ENST00000623134 1869 ntBASIC22.37■■□□□ 1.17
RAB42Q8N4Z0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAB42Q8N4Z0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.36■■□□□ 1.17
RAB42Q8N4Z0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAB42Q8N4Z0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RAB42Q8N4Z0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.35■■□□□ 1.17
RAB42Q8N4Z0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.35■■□□□ 1.17
RAB42Q8N4Z0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.35■■□□□ 1.17
RAB42Q8N4Z0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.35■■□□□ 1.17
RAB42Q8N4Z0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAB42Q8N4Z0 LINC01124-201ENST00000409786 2117 ntBASIC22.35■■□□□ 1.17
RAB42Q8N4Z0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RAB42Q8N4Z0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 AC092028.1-203ENST00000608262 953 ntBASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RAB42Q8N4Z0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.33■■□□□ 1.17
RAB42Q8N4Z0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms