Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
DDX60Q8IY21 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.9■■■□□ 2.22
DDX60Q8IY21 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC28.89■■■□□ 2.22
DDX60Q8IY21 AC133561.4-201ENST00000566112 224 ntBASIC28.89■■■□□ 2.22
DDX60Q8IY21 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
DDX60Q8IY21 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.89■■■□□ 2.22
DDX60Q8IY21 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
DDX60Q8IY21 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.89■■■□□ 2.22
DDX60Q8IY21 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.89■■■□□ 2.22
DDX60Q8IY21 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.21
DDX60Q8IY21 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
DDX60Q8IY21 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
DDX60Q8IY21 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
DDX60Q8IY21 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
DDX60Q8IY21 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
DDX60Q8IY21 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
DDX60Q8IY21 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.88■■■□□ 2.21
DDX60Q8IY21 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.88■■■□□ 2.21
DDX60Q8IY21 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC28.88■■■□□ 2.21
DDX60Q8IY21 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.88■■■□□ 2.21
DDX60Q8IY21 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
DDX60Q8IY21 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
DDX60Q8IY21 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
DDX60Q8IY21 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
DDX60Q8IY21 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
DDX60Q8IY21 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC28.86■■■□□ 2.21
DDX60Q8IY21 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.86■■■□□ 2.21
DDX60Q8IY21 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
DDX60Q8IY21 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.86■■■□□ 2.21
DDX60Q8IY21 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.86■■■□□ 2.21
DDX60Q8IY21 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.86■■■□□ 2.21
DDX60Q8IY21 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
DDX60Q8IY21 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
DDX60Q8IY21 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.86■■■□□ 2.21
DDX60Q8IY21 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
DDX60Q8IY21 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
DDX60Q8IY21 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.86■■■□□ 2.21
DDX60Q8IY21 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
DDX60Q8IY21 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
DDX60Q8IY21 ZNRF2P3-201ENST00000424200 374 ntBASIC28.84■■■□□ 2.21
DDX60Q8IY21 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
DDX60Q8IY21 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
DDX60Q8IY21 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.84■■■□□ 2.21
DDX60Q8IY21 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
DDX60Q8IY21 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC28.83■■■□□ 2.21
DDX60Q8IY21 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.83■■■□□ 2.21
DDX60Q8IY21 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.83■■■□□ 2.21
DDX60Q8IY21 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
DDX60Q8IY21 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
DDX60Q8IY21 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
DDX60Q8IY21 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.83■■■□□ 2.21
DDX60Q8IY21 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.83■■■□□ 2.21
DDX60Q8IY21 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
DDX60Q8IY21 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.82■■■□□ 2.2
DDX60Q8IY21 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC28.82■■■□□ 2.2
DDX60Q8IY21 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.82■■■□□ 2.2
DDX60Q8IY21 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.82■■■□□ 2.2
DDX60Q8IY21 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC28.82■■■□□ 2.2
DDX60Q8IY21 AC005837.3-201ENST00000612163 286 ntBASIC28.82■■■□□ 2.2
DDX60Q8IY21 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
DDX60Q8IY21 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.81■■■□□ 2.2
DDX60Q8IY21 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
DDX60Q8IY21 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
DDX60Q8IY21 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
DDX60Q8IY21 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
DDX60Q8IY21 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.81■■■□□ 2.2
DDX60Q8IY21 AC091060.1-201ENST00000623524 1766 ntBASIC28.81■■■□□ 2.2
DDX60Q8IY21 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.81■■■□□ 2.2
DDX60Q8IY21 AC005703.6-201ENST00000623265 1329 ntBASIC28.81■■■□□ 2.2
DDX60Q8IY21 UNC93B3-201ENST00000308076 687 ntBASIC28.8■■■□□ 2.2
DDX60Q8IY21 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
DDX60Q8IY21 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.8■■■□□ 2.2
DDX60Q8IY21 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.8■■■□□ 2.2
DDX60Q8IY21 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.8■■■□□ 2.2
DDX60Q8IY21 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
DDX60Q8IY21 AC024257.2-201ENST00000549699 147 ntBASIC28.8■■■□□ 2.2
DDX60Q8IY21 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
DDX60Q8IY21 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.8■■■□□ 2.2
DDX60Q8IY21 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
DDX60Q8IY21 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
DDX60Q8IY21 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
DDX60Q8IY21 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.79■■■□□ 2.2
DDX60Q8IY21 AC135279.3-201ENST00000610945 1311 ntBASIC28.79■■■□□ 2.2
DDX60Q8IY21 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
DDX60Q8IY21 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.79■■■□□ 2.2
DDX60Q8IY21 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
DDX60Q8IY21 RARRES2P6-201ENST00000567333 442 ntBASIC28.79■■■□□ 2.2
DDX60Q8IY21 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
DDX60Q8IY21 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
DDX60Q8IY21 AL136162.1-201ENST00000607711 1078 ntBASIC28.78■■■□□ 2.2
DDX60Q8IY21 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.78■■■□□ 2.2
DDX60Q8IY21 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
DDX60Q8IY21 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
DDX60Q8IY21 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
DDX60Q8IY21 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.77■■■□□ 2.2
DDX60Q8IY21 PBX2P1-201ENST00000493219 1291 ntBASIC28.77■■■□□ 2.2
DDX60Q8IY21 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.77■■■□□ 2.2
DDX60Q8IY21 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
DDX60Q8IY21 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
DDX60Q8IY21 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms