Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM48Q8IWZ4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.57■■□□□ 1.2
TRIM48Q8IWZ4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 MIR6724-1-201ENST00000616420 92 ntBASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 MIR6724-2-201ENST00000616483 92 ntBASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 MIR6724-4-201ENST00000617390 92 ntBASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 MIR6724-3-201ENST00000622482 92 ntBASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
TRIM48Q8IWZ4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM48Q8IWZ4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TRIM48Q8IWZ4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM48Q8IWZ4 SNX5-217ENST00000606557 1087 ntBASIC22.55■■□□□ 1.2
TRIM48Q8IWZ4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM48Q8IWZ4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM48Q8IWZ4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM48Q8IWZ4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TRIM48Q8IWZ4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM48Q8IWZ4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM48Q8IWZ4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM48Q8IWZ4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TRIM48Q8IWZ4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM48Q8IWZ4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM48Q8IWZ4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM48Q8IWZ4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM48Q8IWZ4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM48Q8IWZ4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM48Q8IWZ4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TRIM48Q8IWZ4 AC008406.3-201ENST00000620001 1374 ntBASIC22.52■■□□□ 1.2
TRIM48Q8IWZ4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM48Q8IWZ4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
TRIM48Q8IWZ4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
TRIM48Q8IWZ4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
TRIM48Q8IWZ4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 AL356740.2-201ENST00000601559 647 ntBASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM48Q8IWZ4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM48Q8IWZ4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms