Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SHFQ7M4L6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHFQ7M4L6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
SHFQ7M4L6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SHFQ7M4L6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHFQ7M4L6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHFQ7M4L6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHFQ7M4L6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHFQ7M4L6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.79■□□□□ 0.92
SHFQ7M4L6 RAP2CP1-202ENST00000605179 643 ntBASIC20.79■□□□□ 0.92
SHFQ7M4L6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHFQ7M4L6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHFQ7M4L6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHFQ7M4L6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHFQ7M4L6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHFQ7M4L6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHFQ7M4L6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.78■□□□□ 0.92
SHFQ7M4L6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHFQ7M4L6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHFQ7M4L6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHFQ7M4L6 GPX1-201ENST00000419349 1106 ntBASIC20.78■□□□□ 0.92
SHFQ7M4L6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.78■□□□□ 0.92
SHFQ7M4L6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHFQ7M4L6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHFQ7M4L6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHFQ7M4L6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.77■□□□□ 0.92
SHFQ7M4L6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHFQ7M4L6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHFQ7M4L6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SHFQ7M4L6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.77■□□□□ 0.92
SHFQ7M4L6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SHFQ7M4L6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHFQ7M4L6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.77■□□□□ 0.92
SHFQ7M4L6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHFQ7M4L6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHFQ7M4L6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHFQ7M4L6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHFQ7M4L6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHFQ7M4L6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SHFQ7M4L6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHFQ7M4L6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHFQ7M4L6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.77■□□□□ 0.91
SHFQ7M4L6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
SHFQ7M4L6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.76■□□□□ 0.91
SHFQ7M4L6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SHFQ7M4L6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHFQ7M4L6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.76■□□□□ 0.91
SHFQ7M4L6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.76■□□□□ 0.91
SHFQ7M4L6 AC026202.3-201ENST00000600805 1127 ntBASIC20.76■□□□□ 0.91
SHFQ7M4L6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.76■□□□□ 0.91
SHFQ7M4L6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHFQ7M4L6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHFQ7M4L6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHFQ7M4L6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHFQ7M4L6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHFQ7M4L6 FOXO3B-201ENST00000395675 1928 ntBASIC20.75■□□□□ 0.91
SHFQ7M4L6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHFQ7M4L6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.75■□□□□ 0.91
SHFQ7M4L6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHFQ7M4L6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.75■□□□□ 0.91
SHFQ7M4L6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SHFQ7M4L6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHFQ7M4L6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SHFQ7M4L6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHFQ7M4L6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHFQ7M4L6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHFQ7M4L6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHFQ7M4L6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SHFQ7M4L6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHFQ7M4L6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHFQ7M4L6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.74■□□□□ 0.91
SHFQ7M4L6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHFQ7M4L6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHFQ7M4L6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.73■□□□□ 0.91
SHFQ7M4L6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHFQ7M4L6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SHFQ7M4L6 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.73■□□□□ 0.91
SHFQ7M4L6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.73■□□□□ 0.91
SHFQ7M4L6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SHFQ7M4L6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHFQ7M4L6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SHFQ7M4L6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.72■□□□□ 0.91
SHFQ7M4L6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHFQ7M4L6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHFQ7M4L6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHFQ7M4L6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHFQ7M4L6 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.71■□□□□ 0.91
SHFQ7M4L6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.71■□□□□ 0.91
SHFQ7M4L6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.71■□□□□ 0.91
SHFQ7M4L6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHFQ7M4L6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHFQ7M4L6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHFQ7M4L6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHFQ7M4L6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.71■□□□□ 0.91
SHFQ7M4L6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHFQ7M4L6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHFQ7M4L6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHFQ7M4L6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.7■□□□□ 0.9
SHFQ7M4L6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.7■□□□□ 0.9
SHFQ7M4L6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms