Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL4Q6ZR62 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTL4Q6ZR62 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RTL4Q6ZR62 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.53■■□□□ 1.04
RTL4Q6ZR62 MIR4787-201ENST00000607364 84 ntBASIC21.53■■□□□ 1.04
RTL4Q6ZR62 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.53■■□□□ 1.04
RTL4Q6ZR62 AP003733.4-201ENST00000623785 1697 ntBASIC21.53■■□□□ 1.04
RTL4Q6ZR62 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL4Q6ZR62 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTL4Q6ZR62 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RTL4Q6ZR62 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTL4Q6ZR62 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL4Q6ZR62 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTL4Q6ZR62 AC090877.2-201ENST00000558441 1738 ntBASIC21.52■■□□□ 1.04
RTL4Q6ZR62 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.52■■□□□ 1.04
RTL4Q6ZR62 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL4Q6ZR62 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTL4Q6ZR62 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL4Q6ZR62 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTL4Q6ZR62 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTL4Q6ZR62 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTL4Q6ZR62 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 SLC6A10P-202ENST00000431994 2058 ntBASIC21.51■■□□□ 1.03
RTL4Q6ZR62 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTL4Q6ZR62 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTL4Q6ZR62 AC021242.3-201ENST00000607598 1377 ntBASIC21.5■■□□□ 1.03
RTL4Q6ZR62 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTL4Q6ZR62 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTL4Q6ZR62 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.5■■□□□ 1.03
RTL4Q6ZR62 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.5■■□□□ 1.03
RTL4Q6ZR62 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTL4Q6ZR62 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTL4Q6ZR62 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RTL4Q6ZR62 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.49■■□□□ 1.03
RTL4Q6ZR62 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTL4Q6ZR62 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.49■■□□□ 1.03
RTL4Q6ZR62 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.49■■□□□ 1.03
RTL4Q6ZR62 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.49■■□□□ 1.03
RTL4Q6ZR62 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
RTL4Q6ZR62 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RTL4Q6ZR62 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.49■■□□□ 1.03
RTL4Q6ZR62 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RTL4Q6ZR62 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTL4Q6ZR62 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.48■■□□□ 1.03
RTL4Q6ZR62 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RTL4Q6ZR62 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.48■■□□□ 1.03
RTL4Q6ZR62 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RTL4Q6ZR62 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RTL4Q6ZR62 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RTL4Q6ZR62 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTL4Q6ZR62 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.47■■□□□ 1.03
RTL4Q6ZR62 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.47■■□□□ 1.03
RTL4Q6ZR62 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.47■■□□□ 1.03
RTL4Q6ZR62 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.47■■□□□ 1.03
RTL4Q6ZR62 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RTL4Q6ZR62 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL4Q6ZR62 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL4Q6ZR62 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RTL4Q6ZR62 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL4Q6ZR62 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
RTL4Q6ZR62 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL4Q6ZR62 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL4Q6ZR62 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL4Q6ZR62 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTL4Q6ZR62 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.45■■□□□ 1.03
RTL4Q6ZR62 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RTL4Q6ZR62 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RTL4Q6ZR62 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTL4Q6ZR62 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL4Q6ZR62 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL4Q6ZR62 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.45■■□□□ 1.02
RTL4Q6ZR62 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL4Q6ZR62 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.45■■□□□ 1.02
RTL4Q6ZR62 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTL4Q6ZR62 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL4Q6ZR62 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL4Q6ZR62 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL4Q6ZR62 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.44■■□□□ 1.02
RTL4Q6ZR62 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTL4Q6ZR62 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTL4Q6ZR62 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.44■■□□□ 1.02
RTL4Q6ZR62 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
RTL4Q6ZR62 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTL4Q6ZR62 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.43■■□□□ 1.02
RTL4Q6ZR62 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL4Q6ZR62 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL4Q6ZR62 AL356441.2-201ENST00000443009 864 ntBASIC21.43■■□□□ 1.02
RTL4Q6ZR62 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.43■■□□□ 1.02
RTL4Q6ZR62 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTL4Q6ZR62 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms