Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 AC091060.1-201ENST00000623524 1766 ntBASIC26.6■■□□□ 1.85
SNRNP48Q6IEG0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.6■■□□□ 1.85
SNRNP48Q6IEG0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.6■■□□□ 1.85
SNRNP48Q6IEG0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.6■■□□□ 1.85
SNRNP48Q6IEG0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNRNP48Q6IEG0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNRNP48Q6IEG0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNRNP48Q6IEG0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.59■■□□□ 1.85
SNRNP48Q6IEG0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.59■■□□□ 1.85
SNRNP48Q6IEG0 AC133561.4-201ENST00000566112 224 ntBASIC26.59■■□□□ 1.85
SNRNP48Q6IEG0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNRNP48Q6IEG0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNRNP48Q6IEG0 AC131274.2-201ENST00000580697 1507 ntBASIC26.59■■□□□ 1.85
SNRNP48Q6IEG0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SNRNP48Q6IEG0 AC005703.6-201ENST00000623265 1329 ntBASIC26.58■■□□□ 1.85
SNRNP48Q6IEG0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.58■■□□□ 1.84
SNRNP48Q6IEG0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 SRD5A1P1-201ENST00000442297 786 ntBASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 PBX2P1-201ENST00000493219 1291 ntBASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 MIR6089-201ENST00000616698 64 ntBASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SNRNP48Q6IEG0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SNRNP48Q6IEG0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.56■■□□□ 1.84
SNRNP48Q6IEG0 AC106739.1-201ENST00000617035 715 ntBASIC26.56■■□□□ 1.84
SNRNP48Q6IEG0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SNRNP48Q6IEG0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 AC145676.1-201ENST00000514988 2004 ntBASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 UNC93B3-201ENST00000308076 687 ntBASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SNRNP48Q6IEG0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SNRNP48Q6IEG0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
SNRNP48Q6IEG0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
SNRNP48Q6IEG0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SNRNP48Q6IEG0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
SNRNP48Q6IEG0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
SNRNP48Q6IEG0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.54■■□□□ 1.84
SNRNP48Q6IEG0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
SNRNP48Q6IEG0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.53■■□□□ 1.84
SNRNP48Q6IEG0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SNRNP48Q6IEG0 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.53■■□□□ 1.84
SNRNP48Q6IEG0 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.53■■□□□ 1.84
SNRNP48Q6IEG0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.53■■□□□ 1.84
SNRNP48Q6IEG0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNRNP48Q6IEG0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SNRNP48Q6IEG0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.52■■□□□ 1.84
SNRNP48Q6IEG0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.52■■□□□ 1.84
SNRNP48Q6IEG0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SNRNP48Q6IEG0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.51■■□□□ 1.84
SNRNP48Q6IEG0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
SNRNP48Q6IEG0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.51■■□□□ 1.83
SNRNP48Q6IEG0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.51■■□□□ 1.83
SNRNP48Q6IEG0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SNRNP48Q6IEG0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.51■■□□□ 1.83
SNRNP48Q6IEG0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.51■■□□□ 1.83
SNRNP48Q6IEG0 AL136162.1-201ENST00000607711 1078 ntBASIC26.51■■□□□ 1.83
SNRNP48Q6IEG0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
SNRNP48Q6IEG0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.51■■□□□ 1.83
SNRNP48Q6IEG0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.51■■□□□ 1.83
SNRNP48Q6IEG0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
SNRNP48Q6IEG0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SNRNP48Q6IEG0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SNRNP48Q6IEG0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SNRNP48Q6IEG0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
SNRNP48Q6IEG0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.49■■□□□ 1.83
SNRNP48Q6IEG0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SNRNP48Q6IEG0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.49■■□□□ 1.83
SNRNP48Q6IEG0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.49■■□□□ 1.83
SNRNP48Q6IEG0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
SNRNP48Q6IEG0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.48■■□□□ 1.83
SNRNP48Q6IEG0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SNRNP48Q6IEG0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SNRNP48Q6IEG0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.48■■□□□ 1.83
SNRNP48Q6IEG0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRNP48Q6IEG0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SNRNP48Q6IEG0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
SNRNP48Q6IEG0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SNRNP48Q6IEG0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SNRNP48Q6IEG0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNRNP48Q6IEG0 AC135279.3-201ENST00000610945 1311 ntBASIC26.46■■□□□ 1.83
SNRNP48Q6IEG0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNRNP48Q6IEG0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.46■■□□□ 1.83
SNRNP48Q6IEG0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.46■■□□□ 1.83
SNRNP48Q6IEG0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.46■■□□□ 1.83
SNRNP48Q6IEG0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
SNRNP48Q6IEG0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SNRNP48Q6IEG0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SNRNP48Q6IEG0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms