Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.6■■■□□ 2.33
RC3H1Q5TC82 PLD4-205ENST00000553861 667 ntTSL 2 BASIC29.6■■■□□ 2.33
RC3H1Q5TC82 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.6■■■□□ 2.33
RC3H1Q5TC82 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
RC3H1Q5TC82 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
RC3H1Q5TC82 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
RC3H1Q5TC82 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
RC3H1Q5TC82 ERN1-208ENST00000606895 2068 ntBASIC29.59■■■□□ 2.33
RC3H1Q5TC82 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
RC3H1Q5TC82 AL138724.1-201ENST00000606771 1088 ntBASIC29.59■■■□□ 2.33
RC3H1Q5TC82 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.59■■■□□ 2.33
RC3H1Q5TC82 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
RC3H1Q5TC82 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
RC3H1Q5TC82 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
RC3H1Q5TC82 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RC3H1Q5TC82 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
RC3H1Q5TC82 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
RC3H1Q5TC82 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
RC3H1Q5TC82 AC011298.3-201ENST00000615796 283 ntBASIC29.58■■■□□ 2.33
RC3H1Q5TC82 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RC3H1Q5TC82 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RC3H1Q5TC82 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.57■■■□□ 2.32
RC3H1Q5TC82 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
RC3H1Q5TC82 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
RC3H1Q5TC82 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RC3H1Q5TC82 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RC3H1Q5TC82 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RC3H1Q5TC82 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC29.57■■■□□ 2.32
RC3H1Q5TC82 AL162430.1-201ENST00000480705 870 ntBASIC29.57■■■□□ 2.32
RC3H1Q5TC82 AC027682.1-201ENST00000562846 899 ntBASIC29.57■■■□□ 2.32
RC3H1Q5TC82 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
RC3H1Q5TC82 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
RC3H1Q5TC82 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.56■■■□□ 2.32
RC3H1Q5TC82 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RC3H1Q5TC82 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.56■■■□□ 2.32
RC3H1Q5TC82 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RC3H1Q5TC82 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.56■■■□□ 2.32
RC3H1Q5TC82 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.56■■■□□ 2.32
RC3H1Q5TC82 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
RC3H1Q5TC82 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RC3H1Q5TC82 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
RC3H1Q5TC82 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RC3H1Q5TC82 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
RC3H1Q5TC82 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RC3H1Q5TC82 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RC3H1Q5TC82 AC099791.2-201ENST00000605725 427 ntBASIC29.55■■■□□ 2.32
RC3H1Q5TC82 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.55■■■□□ 2.32
RC3H1Q5TC82 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
RC3H1Q5TC82 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RC3H1Q5TC82 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.55■■■□□ 2.32
RC3H1Q5TC82 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.54■■■□□ 2.32
RC3H1Q5TC82 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC29.54■■■□□ 2.32
RC3H1Q5TC82 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RC3H1Q5TC82 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RC3H1Q5TC82 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RC3H1Q5TC82 AC131274.2-201ENST00000580697 1507 ntBASIC29.54■■■□□ 2.32
RC3H1Q5TC82 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
RC3H1Q5TC82 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
RC3H1Q5TC82 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
RC3H1Q5TC82 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
RC3H1Q5TC82 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
RC3H1Q5TC82 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
RC3H1Q5TC82 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RC3H1Q5TC82 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC29.52■■■□□ 2.32
RC3H1Q5TC82 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.52■■■□□ 2.32
RC3H1Q5TC82 IRS3P-201ENST00000223076 1006 ntBASIC29.51■■■□□ 2.31
RC3H1Q5TC82 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC29.51■■■□□ 2.31
RC3H1Q5TC82 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.51■■■□□ 2.31
RC3H1Q5TC82 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC29.51■■■□□ 2.31
RC3H1Q5TC82 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC29.51■■■□□ 2.31
RC3H1Q5TC82 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC29.51■■■□□ 2.31
RC3H1Q5TC82 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.51■■■□□ 2.31
RC3H1Q5TC82 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
RC3H1Q5TC82 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RC3H1Q5TC82 GLI3-203ENST00000437480 451 ntTSL 2 BASIC29.5■■■□□ 2.31
RC3H1Q5TC82 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC29.5■■■□□ 2.31
RC3H1Q5TC82 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.5■■■□□ 2.31
RC3H1Q5TC82 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RC3H1Q5TC82 AC010501.1-201ENST00000606270 1962 ntBASIC29.5■■■□□ 2.31
RC3H1Q5TC82 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RC3H1Q5TC82 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RC3H1Q5TC82 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
RC3H1Q5TC82 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
RC3H1Q5TC82 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RC3H1Q5TC82 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC29.48■■■□□ 2.31
RC3H1Q5TC82 AC008764.7-201ENST00000593779 1081 ntBASIC29.48■■■□□ 2.31
RC3H1Q5TC82 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RC3H1Q5TC82 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RC3H1Q5TC82 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.47■■■□□ 2.31
RC3H1Q5TC82 AC009102.2-201ENST00000606772 1639 ntBASIC29.47■■■□□ 2.31
RC3H1Q5TC82 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.47■■■□□ 2.31
RC3H1Q5TC82 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RC3H1Q5TC82 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RC3H1Q5TC82 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RC3H1Q5TC82 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RC3H1Q5TC82 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RC3H1Q5TC82 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.46■■■□□ 2.31
RC3H1Q5TC82 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.46■■■□□ 2.31
RC3H1Q5TC82 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
RC3H1Q5TC82 AC099791.1-201ENST00000416440 715 ntBASIC29.46■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms