Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RUNDC3AQ59EK9 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RUNDC3AQ59EK9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
RUNDC3AQ59EK9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RUNDC3AQ59EK9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RUNDC3AQ59EK9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 AC079834.2-201ENST00000609776 1949 ntBASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.8■■□□□ 1.08
RUNDC3AQ59EK9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 GPX1-201ENST00000419349 1106 ntBASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RUNDC3AQ59EK9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 AC009831.1-201ENST00000580420 1582 ntBASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RUNDC3AQ59EK9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RUNDC3AQ59EK9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RUNDC3AQ59EK9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RUNDC3AQ59EK9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RUNDC3AQ59EK9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RUNDC3AQ59EK9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RUNDC3AQ59EK9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.77■■□□□ 1.08
RUNDC3AQ59EK9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RUNDC3AQ59EK9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RUNDC3AQ59EK9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RUNDC3AQ59EK9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
RUNDC3AQ59EK9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.76■■□□□ 1.07
RUNDC3AQ59EK9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RUNDC3AQ59EK9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RUNDC3AQ59EK9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RUNDC3AQ59EK9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RUNDC3AQ59EK9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RUNDC3AQ59EK9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.76■■□□□ 1.07
RUNDC3AQ59EK9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RUNDC3AQ59EK9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RUNDC3AQ59EK9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RUNDC3AQ59EK9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.75■■□□□ 1.07
RUNDC3AQ59EK9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RUNDC3AQ59EK9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.75■■□□□ 1.07
RUNDC3AQ59EK9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.75■■□□□ 1.07
RUNDC3AQ59EK9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.75■■□□□ 1.07
RUNDC3AQ59EK9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RUNDC3AQ59EK9 AC133552.2-201ENST00000619106 1032 ntBASIC21.75■■□□□ 1.07
RUNDC3AQ59EK9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RUNDC3AQ59EK9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RUNDC3AQ59EK9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.73■■□□□ 1.07
RUNDC3AQ59EK9 AC090877.2-201ENST00000558441 1738 ntBASIC21.73■■□□□ 1.07
RUNDC3AQ59EK9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
RUNDC3AQ59EK9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.73■■□□□ 1.07
RUNDC3AQ59EK9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RUNDC3AQ59EK9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.73■■□□□ 1.07
RUNDC3AQ59EK9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RUNDC3AQ59EK9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RUNDC3AQ59EK9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms