Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 AL022069.1-201ENST00000568025 1636 ntBASIC22■■□□□ 1.11
TMEM35AQ53FP2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22■■□□□ 1.11
TMEM35AQ53FP2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22■■□□□ 1.11
TMEM35AQ53FP2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22■■□□□ 1.11
TMEM35AQ53FP2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM35AQ53FP2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM35AQ53FP2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM35AQ53FP2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 AF131216.4-201ENST00000638924 1588 ntBASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM35AQ53FP2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM35AQ53FP2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.98■■□□□ 1.11
TMEM35AQ53FP2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TMEM35AQ53FP2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM35AQ53FP2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.98■■□□□ 1.11
TMEM35AQ53FP2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM35AQ53FP2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM35AQ53FP2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.98■■□□□ 1.11
TMEM35AQ53FP2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.98■■□□□ 1.11
TMEM35AQ53FP2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM35AQ53FP2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM35AQ53FP2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
TMEM35AQ53FP2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM35AQ53FP2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM35AQ53FP2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.96■■□□□ 1.11
TMEM35AQ53FP2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM35AQ53FP2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM35AQ53FP2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
TMEM35AQ53FP2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TMEM35AQ53FP2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.95■■□□□ 1.1
TMEM35AQ53FP2 RARRES2P1-201ENST00000474487 481 ntBASIC21.95■■□□□ 1.1
TMEM35AQ53FP2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM35AQ53FP2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM35AQ53FP2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM35AQ53FP2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.94■■□□□ 1.1
TMEM35AQ53FP2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM35AQ53FP2 AC137630.3-201ENST00000607245 391 ntBASIC21.94■■□□□ 1.1
TMEM35AQ53FP2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM35AQ53FP2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM35AQ53FP2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.94■■□□□ 1.1
TMEM35AQ53FP2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TMEM35AQ53FP2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
TMEM35AQ53FP2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TMEM35AQ53FP2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
TMEM35AQ53FP2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TMEM35AQ53FP2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.93■■□□□ 1.1
TMEM35AQ53FP2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TMEM35AQ53FP2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.93■■□□□ 1.1
TMEM35AQ53FP2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.93■■□□□ 1.1
TMEM35AQ53FP2 AC131274.2-201ENST00000580697 1507 ntBASIC21.93■■□□□ 1.1
TMEM35AQ53FP2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.93■■□□□ 1.1
TMEM35AQ53FP2 AC004812.2-201ENST00000611079 2094 ntBASIC21.92■■□□□ 1.1
TMEM35AQ53FP2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TMEM35AQ53FP2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM35AQ53FP2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM35AQ53FP2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM35AQ53FP2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM35AQ53FP2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM35AQ53FP2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM35AQ53FP2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM35AQ53FP2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
TMEM35AQ53FP2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.91■■□□□ 1.1
TMEM35AQ53FP2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TMEM35AQ53FP2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TMEM35AQ53FP2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.91■■□□□ 1.1
TMEM35AQ53FP2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TMEM35AQ53FP2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.9■■□□□ 1.1
TMEM35AQ53FP2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.9■■□□□ 1.1
TMEM35AQ53FP2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TMEM35AQ53FP2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TMEM35AQ53FP2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TMEM35AQ53FP2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.89■■□□□ 1.09
TMEM35AQ53FP2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TMEM35AQ53FP2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TMEM35AQ53FP2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMEM35AQ53FP2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM35AQ53FP2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM35AQ53FP2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMEM35AQ53FP2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms