Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H3Q16695 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.46■□□□□ 0.87
HIST3H3Q16695 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H3Q16695 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H3Q16695 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIST3H3Q16695 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST3H3Q16695 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.45■□□□□ 0.86
HIST3H3Q16695 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.45■□□□□ 0.86
HIST3H3Q16695 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HIST3H3Q16695 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST3H3Q16695 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.45■□□□□ 0.86
HIST3H3Q16695 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIST3H3Q16695 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
HIST3H3Q16695 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H3Q16695 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.44■□□□□ 0.86
HIST3H3Q16695 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H3Q16695 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
HIST3H3Q16695 MIR4281-201ENST00000580852 62 ntBASIC20.44■□□□□ 0.86
HIST3H3Q16695 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HIST3H3Q16695 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H3Q16695 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H3Q16695 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.44■□□□□ 0.86
HIST3H3Q16695 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H3Q16695 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H3Q16695 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H3Q16695 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H3Q16695 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H3Q16695 AC103724.3-201ENST00000564481 992 ntBASIC20.43■□□□□ 0.86
HIST3H3Q16695 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H3Q16695 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HIST3H3Q16695 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIST3H3Q16695 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HIST3H3Q16695 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
HIST3H3Q16695 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HIST3H3Q16695 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIST3H3Q16695 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST3H3Q16695 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST3H3Q16695 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HIST3H3Q16695 YBX1P4-201ENST00000392794 808 ntBASIC20.42■□□□□ 0.86
HIST3H3Q16695 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST3H3Q16695 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
HIST3H3Q16695 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIST3H3Q16695 AF131216.4-201ENST00000638924 1588 ntBASIC20.42■□□□□ 0.86
HIST3H3Q16695 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H3Q16695 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
HIST3H3Q16695 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H3Q16695 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H3Q16695 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H3Q16695 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HIST3H3Q16695 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIST3H3Q16695 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.41■□□□□ 0.86
HIST3H3Q16695 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
HIST3H3Q16695 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.4■□□□□ 0.86
HIST3H3Q16695 KRT8P33-201ENST00000508125 1423 ntBASIC20.4■□□□□ 0.86
HIST3H3Q16695 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIST3H3Q16695 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIST3H3Q16695 AL022069.1-201ENST00000568025 1636 ntBASIC20.39■□□□□ 0.86
HIST3H3Q16695 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST3H3Q16695 AC131274.2-201ENST00000580697 1507 ntBASIC20.39■□□□□ 0.85
HIST3H3Q16695 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST3H3Q16695 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.39■□□□□ 0.85
HIST3H3Q16695 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.39■□□□□ 0.85
HIST3H3Q16695 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.39■□□□□ 0.85
HIST3H3Q16695 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.39■□□□□ 0.85
HIST3H3Q16695 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HIST3H3Q16695 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIST3H3Q16695 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.39■□□□□ 0.85
HIST3H3Q16695 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HIST3H3Q16695 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HIST3H3Q16695 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H3Q16695 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H3Q16695 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H3Q16695 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.38■□□□□ 0.85
HIST3H3Q16695 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H3Q16695 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H3Q16695 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H3Q16695 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIST3H3Q16695 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H3Q16695 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.37■□□□□ 0.85
HIST3H3Q16695 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.37■□□□□ 0.85
HIST3H3Q16695 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H3Q16695 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HIST3H3Q16695 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HIST3H3Q16695 ABCB10P4-201ENST00000566803 2184 ntBASIC20.36■□□□□ 0.85
HIST3H3Q16695 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H3Q16695 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H3Q16695 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H3Q16695 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H3Q16695 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H3Q16695 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H3Q16695 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H3Q16695 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H3Q16695 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST3H3Q16695 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
HIST3H3Q16695 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HIST3H3Q16695 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST3H3Q16695 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST3H3Q16695 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.35■□□□□ 0.85
HIST3H3Q16695 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.35■□□□□ 0.85
HIST3H3Q16695 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms