Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 GRX4YER174C 735 nt5.18□□□□□ -1.58
DDC1Q08949 MF(ALPHA)2YGL089C 363 nt5.18□□□□□ -1.58
DDC1Q08949 YGR035W-AYGR035W-A 222 nt5.18□□□□□ -1.58
DDC1Q08949 PUS6YGR169C 1215 nt5.18□□□□□ -1.58
DDC1Q08949 YHR145CYHR145C 357 nt5.18□□□□□ -1.58
DDC1Q08949 REV7YIL139C 738 nt5.18□□□□□ -1.58
DDC1Q08949 YKL223WYKL223W 333 nt5.18□□□□□ -1.58
DDC1Q08949 SLD7YOR060C 774 nt5.18□□□□□ -1.58
DDC1Q08949 CKA2YOR061W 1020 nt5.18□□□□□ -1.58
DDC1Q08949 YBR016WYBR016W 387 nt5.18□□□□□ -1.58
DDC1Q08949 SEC18YBR080C 2277 nt5.18□□□□□ -1.58
DDC1Q08949 VHS1YDR247W 1386 nt5.17□□□□□ -1.58
DDC1Q08949 BPL1YDL141W 2073 nt5.17□□□□□ -1.58
DDC1Q08949 NSG1YHR133C 876 nt5.17□□□□□ -1.58
DDC1Q08949 YJL107CYJL107C 1164 nt5.17□□□□□ -1.58
DDC1Q08949 YJR085CYJR085C 318 nt5.17□□□□□ -1.58
DDC1Q08949 NOP8YOL144W 1455 nt5.17□□□□□ -1.58
DDC1Q08949 GDB1YPR184W 4611 nt5.17□□□□□ -1.58
DDC1Q08949 MNN2YBR015C 1794 nt5.16□□□□□ -1.58
DDC1Q08949 RIM101YHL027W 1878 nt5.16□□□□□ -1.58
DDC1Q08949 TRP1YDR007W 675 nt5.16□□□□□ -1.58
DDC1Q08949 ARO2YGL148W 1131 nt5.16□□□□□ -1.58
DDC1Q08949 CAB4YGR277C 918 nt5.16□□□□□ -1.58
DDC1Q08949 CSM2YIL132C 642 nt5.16□□□□□ -1.58
DDC1Q08949 ATG33YLR356W 594 nt5.16□□□□□ -1.58
DDC1Q08949 PZF1YPR186C 1290 nt5.16□□□□□ -1.58
DDC1Q08949 ATE1YGL017W 1512 nt5.16□□□□□ -1.58
DDC1Q08949 MSS116YDR194C 1995 nt5.16□□□□□ -1.58
DDC1Q08949 DAK1YML070W 1755 nt5.16□□□□□ -1.58
DDC1Q08949 EXO1YOR033C 2109 nt5.15□□□□□ -1.58
DDC1Q08949 NOT3YIL038C 2511 nt5.15□□□□□ -1.58
DDC1Q08949 YEL053W-AYEL053W-A 348 nt5.15□□□□□ -1.59
DDC1Q08949 YGR139WYGR139W 339 nt5.15□□□□□ -1.59
DDC1Q08949 FUN19YAL034C 1242 nt5.15□□□□□ -1.59
DDC1Q08949 XPT1YJR133W 630 nt5.15□□□□□ -1.59
DDC1Q08949 PEX22YAL055W 543 nt5.15□□□□□ -1.59
DDC1Q08949 SCW10YMR305C 1170 nt5.15□□□□□ -1.59
DDC1Q08949 FEX1YOR390W 1128 nt5.15□□□□□ -1.59
DDC1Q08949 FEX2YPL279C 1128 nt5.15□□□□□ -1.59
DDC1Q08949 COT1YOR316C 1320 nt5.15□□□□□ -1.59
DDC1Q08949 ARN2YHL047C 1863 nt5.15□□□□□ -1.59
DDC1Q08949 SER33YIL074C 1410 nt5.14□□□□□ -1.59
DDC1Q08949 NGR1YBR212W 2019 nt5.14□□□□□ -1.59
DDC1Q08949 IMA1YGR287C 1770 nt5.14□□□□□ -1.59
DDC1Q08949 PDI1YCL043C 1569 nt5.14□□□□□ -1.59
DDC1Q08949 VPS29YHR012W 849 nt5.14□□□□□ -1.59
DDC1Q08949 SPL2YHR136C 447 nt5.14□□□□□ -1.59
DDC1Q08949 ISU2YOR226C 471 nt5.14□□□□□ -1.59
DDC1Q08949 UBA2YDR390C 1911 nt5.14□□□□□ -1.59
DDC1Q08949 PDC1YLR044C 1692 nt5.14□□□□□ -1.59
DDC1Q08949 CTS1YLR286C 1689 nt5.14□□□□□ -1.59
DDC1Q08949 UBA1YKL210W 3075 nt5.13□□□□□ -1.59
DDC1Q08949 AI5_BETAQ0075 1065 nt5.13□□□□□ -1.59
DDC1Q08949 HXT4YHR092C 1731 nt5.13□□□□□ -1.59
DDC1Q08949 ATG7YHR171W 1893 nt5.13□□□□□ -1.59
DDC1Q08949 AVO1YOL078W 3531 nt5.13□□□□□ -1.59
DDC1Q08949 OCA5YHL029C 2040 nt5.13□□□□□ -1.59
DDC1Q08949 SEC39YLR440C 2130 nt5.12□□□□□ -1.59
DDC1Q08949 YOR1YGR281W 4434 nt5.12□□□□□ -1.59
DDC1Q08949 PAP1YKR002W 1707 nt5.12□□□□□ -1.59
DDC1Q08949 PDE1YGL248W 1110 nt5.12□□□□□ -1.59
DDC1Q08949 YNG2YHR090C 849 nt5.12□□□□□ -1.59
DDC1Q08949 FUI1YBL042C 1920 nt5.12□□□□□ -1.59
DDC1Q08949 WTM2YOR229W 1404 nt5.12□□□□□ -1.59
DDC1Q08949 VID30YGL227W 2877 nt5.12□□□□□ -1.59
DDC1Q08949 PUS1YPL212C 1635 nt5.12□□□□□ -1.59
DDC1Q08949 VPS72YDR485C 2388 nt5.11□□□□□ -1.59
DDC1Q08949 YAL044W-AYAL044W-A 333 nt5.11□□□□□ -1.59
DDC1Q08949 CUE5YOR042W 1236 nt5.11□□□□□ -1.59
DDC1Q08949 PDR10YOR328W 4695 nt5.1□□□□□ -1.59
DDC1Q08949 ZUO1YGR285C 1302 nt5.1□□□□□ -1.59
DDC1Q08949 TUL1YKL034W 2277 nt5.1□□□□□ -1.59
DDC1Q08949 YKL107WYKL107W 930 nt5.1□□□□□ -1.59
DDC1Q08949 MLF3YNL074C 1359 nt5.1□□□□□ -1.59
DDC1Q08949 ETT1YOR051C 1239 nt5.1□□□□□ -1.59
DDC1Q08949 MRI1YPR118W 1236 nt5.1□□□□□ -1.59
DDC1Q08949 GLT1YDL171C 6438 nt5.09□□□□□ -1.59
DDC1Q08949 DBF4YDR052C 2115 nt5.09□□□□□ -1.59
DDC1Q08949 JJJ3YJR097W 519 nt5.09□□□□□ -1.59
DDC1Q08949 SPC97YHR172W 2472 nt5.09□□□□□ -1.59
DDC1Q08949 AFT1YGL071W 2073 nt5.09□□□□□ -1.59
DDC1Q08949 SIP5YMR140W 1470 nt5.08□□□□□ -1.6
DDC1Q08949 ADE3YGR204W 2841 nt5.08□□□□□ -1.6
DDC1Q08949 CUE2YKL090W 1332 nt5.08□□□□□ -1.6
DDC1Q08949 YFR034W-AYFR034W-A 288 nt5.08□□□□□ -1.6
DDC1Q08949 YNL247WYNL247W 2304 nt5.08□□□□□ -1.6
DDC1Q08949 DPB2YPR175W 2070 nt5.08□□□□□ -1.6
DDC1Q08949 KCH1YJR054W 1494 nt5.07□□□□□ -1.6
DDC1Q08949 ARO10YDR380W 1908 nt5.07□□□□□ -1.6
DDC1Q08949 ARB1YER036C 1833 nt5.07□□□□□ -1.6
DDC1Q08949 YAP1802YGR241C 1707 nt5.07□□□□□ -1.6
DDC1Q08949 THI5YFL058W 1023 nt5.07□□□□□ -1.6
DDC1Q08949 PRS1YKL181W 1284 nt5.07□□□□□ -1.6
DDC1Q08949 MIM2YLR099W-A 264 nt5.07□□□□□ -1.6
DDC1Q08949 YMR105W-AYMR105W-A 195 nt5.07□□□□□ -1.6
DDC1Q08949 THI12YNL332W 1023 nt5.07□□□□□ -1.6
DDC1Q08949 RIM15YFL033C 5313 nt5.07□□□□□ -1.6
DDC1Q08949 UGA2YBR006W 1494 nt5.07□□□□□ -1.6
DDC1Q08949 AIM17YHL021C 1398 nt5.06□□□□□ -1.6
DDC1Q08949 YJU2YKL095W 837 nt5.06□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 38.4 ms