Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC233992.3-201ENST00000607491 485 ntBASIC31.93■■■□□ 2.7
COL16A1Q07092 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
COL16A1Q07092 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
COL16A1Q07092 DRD5P2-201ENST00000421395 2012 ntBASIC31.93■■■□□ 2.7
COL16A1Q07092 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
COL16A1Q07092 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
COL16A1Q07092 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC31.93■■■□□ 2.7
COL16A1Q07092 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
COL16A1Q07092 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
COL16A1Q07092 SNX3-202ENST00000349379 890 ntTSL 2 BASIC31.92■■■□□ 2.7
COL16A1Q07092 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC31.92■■■□□ 2.7
COL16A1Q07092 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
COL16A1Q07092 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.92■■■□□ 2.7
COL16A1Q07092 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL16A1Q07092 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
COL16A1Q07092 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.91■■■□□ 2.7
COL16A1Q07092 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL16A1Q07092 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL16A1Q07092 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
COL16A1Q07092 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.91■■■□□ 2.7
COL16A1Q07092 BX842568.3-201ENST00000418104 571 ntBASIC31.91■■■□□ 2.7
COL16A1Q07092 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.91■■■□□ 2.7
COL16A1Q07092 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL16A1Q07092 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
COL16A1Q07092 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.9■■■□□ 2.7
COL16A1Q07092 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
COL16A1Q07092 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
COL16A1Q07092 GRAMD4P2-201ENST00000423297 1097 ntBASIC31.89■■■□□ 2.7
COL16A1Q07092 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC31.89■■■□□ 2.7
COL16A1Q07092 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.89■■■□□ 2.7
COL16A1Q07092 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC31.89■■■□□ 2.7
COL16A1Q07092 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
COL16A1Q07092 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.88■■■□□ 2.69
COL16A1Q07092 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
COL16A1Q07092 EMC9-206ENST00000560403 872 ntTSL 2 BASIC31.87■■■□□ 2.69
COL16A1Q07092 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.87■■■□□ 2.69
COL16A1Q07092 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC31.86■■■□□ 2.69
COL16A1Q07092 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC31.86■■■□□ 2.69
COL16A1Q07092 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.86■■■□□ 2.69
COL16A1Q07092 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL16A1Q07092 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
COL16A1Q07092 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
COL16A1Q07092 AC123595.1-201ENST00000440769 1046 ntBASIC31.86■■■□□ 2.69
COL16A1Q07092 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
COL16A1Q07092 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL16A1Q07092 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
COL16A1Q07092 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL16A1Q07092 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL16A1Q07092 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL16A1Q07092 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
COL16A1Q07092 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL16A1Q07092 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
COL16A1Q07092 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COL16A1Q07092 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.84■■■□□ 2.69
COL16A1Q07092 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
COL16A1Q07092 TK2-208ENST00000545043 1120 ntTSL 2 BASIC31.83■■■□□ 2.69
COL16A1Q07092 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.69
COL16A1Q07092 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
COL16A1Q07092 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC31.82■■■□□ 2.69
COL16A1Q07092 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.82■■■□□ 2.69
COL16A1Q07092 AC006455.2-201ENST00000429931 906 ntBASIC31.82■■■□□ 2.69
COL16A1Q07092 RAP2CP1-201ENST00000605103 478 ntBASIC31.82■■■□□ 2.69
COL16A1Q07092 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC31.82■■■□□ 2.69
COL16A1Q07092 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
COL16A1Q07092 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
COL16A1Q07092 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
COL16A1Q07092 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
COL16A1Q07092 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
COL16A1Q07092 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC31.81■■■□□ 2.68
COL16A1Q07092 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
COL16A1Q07092 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
COL16A1Q07092 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC31.81■■■□□ 2.68
COL16A1Q07092 CCDC92B-201ENST00000575506 885 ntBASIC31.81■■■□□ 2.68
COL16A1Q07092 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.81■■■□□ 2.68
COL16A1Q07092 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
COL16A1Q07092 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
COL16A1Q07092 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
COL16A1Q07092 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
COL16A1Q07092 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
COL16A1Q07092 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
COL16A1Q07092 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
COL16A1Q07092 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
COL16A1Q07092 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC31.79■■■□□ 2.68
COL16A1Q07092 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
COL16A1Q07092 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.78■■■□□ 2.68
COL16A1Q07092 C17orf82-201ENST00000623772 1530 ntBASIC31.78■■■□□ 2.68
COL16A1Q07092 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC31.78■■■□□ 2.68
COL16A1Q07092 LINC01003-201ENST00000564834 1764 ntBASIC31.78■■■□□ 2.68
COL16A1Q07092 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
COL16A1Q07092 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
COL16A1Q07092 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL16A1Q07092 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
COL16A1Q07092 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC31.77■■■□□ 2.68
COL16A1Q07092 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
COL16A1Q07092 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
COL16A1Q07092 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
COL16A1Q07092 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC31.76■■■□□ 2.67
COL16A1Q07092 AC012414.1-201ENST00000556676 535 ntBASIC31.76■■■□□ 2.67
COL16A1Q07092 AC245100.8-202ENST00000629247 1058 ntBASIC31.76■■■□□ 2.67
COL16A1Q07092 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms