Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1AQ02539 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1AQ02539 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.52■□□□□ 0.4
HIST1H1AQ02539 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1AQ02539 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1AQ02539 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1AQ02539 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1AQ02539 MIR6089-201ENST00000616698 64 ntBASIC17.52■□□□□ 0.4
HIST1H1AQ02539 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1AQ02539 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.52■□□□□ 0.39
HIST1H1AQ02539 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HIST1H1AQ02539 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HIST1H1AQ02539 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HIST1H1AQ02539 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.52■□□□□ 0.39
HIST1H1AQ02539 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HIST1H1AQ02539 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1AQ02539 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 AC018755.3-202ENST00000596210 929 ntBASIC17.5■□□□□ 0.39
HIST1H1AQ02539 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST1H1AQ02539 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 AL592293.1-201ENST00000502889 1188 ntBASIC17.49■□□□□ 0.39
HIST1H1AQ02539 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HIST1H1AQ02539 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST1H1AQ02539 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H1AQ02539 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HIST1H1AQ02539 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H1AQ02539 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H1AQ02539 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H1AQ02539 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H1AQ02539 RARRES2P2-201ENST00000394842 485 ntBASIC17.47■□□□□ 0.39
HIST1H1AQ02539 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H1AQ02539 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.47■□□□□ 0.39
HIST1H1AQ02539 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H1AQ02539 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST1H1AQ02539 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST1H1AQ02539 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST1H1AQ02539 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST1H1AQ02539 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HIST1H1AQ02539 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HIST1H1AQ02539 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST1H1AQ02539 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HIST1H1AQ02539 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST1H1AQ02539 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
HIST1H1AQ02539 HSD17B1P1-201ENST00000590052 955 ntBASIC17.45■□□□□ 0.38
HIST1H1AQ02539 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HIST1H1AQ02539 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms