Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 HSX1tR(CCU)J 72 nt5.96□□□□□ -1.46
SSL2Q00578 YLR169WYLR169W 354 nt5.96□□□□□ -1.46
SSL2Q00578 UIP4YPL186C 915 nt5.96□□□□□ -1.46
SSL2Q00578 TIP41YPR040W 1071 nt5.96□□□□□ -1.46
SSL2Q00578 CST6YIL036W 1764 nt5.95□□□□□ -1.46
SSL2Q00578 ROG3YFR022W 2202 nt5.95□□□□□ -1.46
SSL2Q00578 TAX4YJL083W 1815 nt5.95□□□□□ -1.46
SSL2Q00578 YDL158CYDL158C 309 nt5.95□□□□□ -1.46
SSL2Q00578 FSH1YHR049W 732 nt5.95□□□□□ -1.46
SSL2Q00578 ATP12YJL180C 978 nt5.95□□□□□ -1.46
SSL2Q00578 YMR135W-AYMR135W-A 534 nt5.95□□□□□ -1.46
SSL2Q00578 RFA2YNL312W 822 nt5.95□□□□□ -1.46
SSL2Q00578 YOL038C-AYOL038C-A 96 nt5.95□□□□□ -1.46
SSL2Q00578 PEX27YOR193W 1131 nt5.95□□□□□ -1.46
SSL2Q00578 PDB1YBR221C 1101 nt5.95□□□□□ -1.46
SSL2Q00578 NUP1YOR098C 3231 nt5.94□□□□□ -1.46
SSL2Q00578 DUG1YFR044C 1446 nt5.94□□□□□ -1.46
SSL2Q00578 SPO77YLR341W 1434 nt5.94□□□□□ -1.46
SSL2Q00578 MCM21YDR318W 1107 nt5.94□□□□□ -1.46
SSL2Q00578 XPT1YJR133W 630 nt5.94□□□□□ -1.46
SSL2Q00578 SPC42YKL042W 1092 nt5.94□□□□□ -1.46
SSL2Q00578 PRS1YKL181W 1284 nt5.94□□□□□ -1.46
SSL2Q00578 YLR198CYLR198C 360 nt5.94□□□□□ -1.46
SSL2Q00578 YNL228WYNL228W 777 nt5.94□□□□□ -1.46
SSL2Q00578 FRE3YOR381W 2136 nt5.94□□□□□ -1.46
SSL2Q00578 SYG1YIL047C 2709 nt5.94□□□□□ -1.46
SSL2Q00578 PEX7YDR142C 1128 nt5.93□□□□□ -1.46
SSL2Q00578 LSM6YDR378C 261 nt5.93□□□□□ -1.46
SSL2Q00578 PIN2YOR104W 849 nt5.93□□□□□ -1.46
SSL2Q00578 SCO1YBR037C 888 nt5.93□□□□□ -1.46
SSL2Q00578 CLD1YGR110W 1338 nt5.93□□□□□ -1.46
SSL2Q00578 IMG2YCR071C 441 nt5.92□□□□□ -1.46
SSL2Q00578 IPI1YHR085W 1005 nt5.92□□□□□ -1.46
SSL2Q00578 POR2YIL114C 846 nt5.92□□□□□ -1.46
SSL2Q00578 MRP17YKL003C 396 nt5.92□□□□□ -1.46
SSL2Q00578 DCN1YLR128W 810 nt5.92□□□□□ -1.46
SSL2Q00578 CTR3YLR411W 726 nt5.92□□□□□ -1.46
SSL2Q00578 PPA2YMR267W 933 nt5.92□□□□□ -1.46
SSL2Q00578 RPA49YNL248C 1248 nt5.92□□□□□ -1.46
SSL2Q00578 ELC1YPL046C 300 nt5.92□□□□□ -1.46
SSL2Q00578 SLX1YBR228W 915 nt5.92□□□□□ -1.46
SSL2Q00578 YLH47YPR125W 1365 nt5.92□□□□□ -1.46
SSL2Q00578 ARH1YDR376W 1482 nt5.91□□□□□ -1.46
SSL2Q00578 BSC5YNR069C 1470 nt5.91□□□□□ -1.46
SSL2Q00578 ARO9YHR137W 1542 nt5.91□□□□□ -1.46
SSL2Q00578 CAD1YDR423C 1230 nt5.91□□□□□ -1.46
SSL2Q00578 PCL6YER059W 1263 nt5.91□□□□□ -1.46
SSL2Q00578 ARP1YHR129C 1155 nt5.91□□□□□ -1.46
SSL2Q00578 YMR075C-AYMR075C-A 366 nt5.91□□□□□ -1.46
SSL2Q00578 ODC2YOR222W 924 nt5.91□□□□□ -1.46
SSL2Q00578 RAD17YOR368W 1206 nt5.91□□□□□ -1.46
SSL2Q00578 OAZ1YPL052W 879 nt5.91□□□□□ -1.46
SSL2Q00578 RRN3YKL125W 1884 nt5.91□□□□□ -1.46
SSL2Q00578 CUE2YKL090W 1332 nt5.91□□□□□ -1.46
SSL2Q00578 CTF18YMR078C 2226 nt5.91□□□□□ -1.46
SSL2Q00578 TRP4YDR354W 1143 nt5.9□□□□□ -1.46
SSL2Q00578 RPS19BYNL302C 435 nt5.9□□□□□ -1.46
SSL2Q00578 YOL097W-AYOL097W-A 186 nt5.9□□□□□ -1.46
SSL2Q00578 TAZ1YPR140W 1146 nt5.9□□□□□ -1.46
SSL2Q00578 DBF4YDR052C 2115 nt5.9□□□□□ -1.47
SSL2Q00578 KIP2YPL155C 2121 nt5.9□□□□□ -1.47
SSL2Q00578 ECM3YOR092W 1842 nt5.9□□□□□ -1.47
SSL2Q00578 TKL1YPR074C 2043 nt5.89□□□□□ -1.47
SSL2Q00578 YGP1YNL160W 1065 nt5.89□□□□□ -1.47
SSL2Q00578 PCL1YNL289W 840 nt5.89□□□□□ -1.47
SSL2Q00578 FLC3YGL139W 2409 nt5.89□□□□□ -1.47
SSL2Q00578 YDR132CYDR132C 1488 nt5.89□□□□□ -1.47
SSL2Q00578 OXP1YKL215C 3861 nt5.89□□□□□ -1.47
SSL2Q00578 FAT3YKL187C 2253 nt5.88□□□□□ -1.47
SSL2Q00578 YCR097W-AYCR097W-A 267 nt5.88□□□□□ -1.47
SSL2Q00578 YDL121CYDL121C 450 nt5.88□□□□□ -1.47
SSL2Q00578 YER138W-AYER138W-A 105 nt5.88□□□□□ -1.47
SSL2Q00578 GTO1YGR154C 1071 nt5.88□□□□□ -1.47
SSL2Q00578 COX17YLL009C 210 nt5.88□□□□□ -1.47
SSL2Q00578 YLL059CYLL059C 507 nt5.88□□□□□ -1.47
SSL2Q00578 SSP120YLR250W 705 nt5.88□□□□□ -1.47
SSL2Q00578 YBL107W-AYBL107W-A 105 nt5.88□□□□□ -1.47
SSL2Q00578 BAG7YOR134W 1230 nt5.88□□□□□ -1.47
SSL2Q00578 ISU2YOR226C 471 nt5.88□□□□□ -1.47
SSL2Q00578 MST1YKL194C 1389 nt5.88□□□□□ -1.47
SSL2Q00578 ULA1YPL003W 1389 nt5.88□□□□□ -1.47
SSL2Q00578 TOS4YLR183C 1470 nt5.88□□□□□ -1.47
SSL2Q00578 SRV2YNL138W 1581 nt5.88□□□□□ -1.47
SSL2Q00578 YDR161WYDR161W 1164 nt5.87□□□□□ -1.47
SSL2Q00578 TDH3YGR192C 999 nt5.87□□□□□ -1.47
SSL2Q00578 YLR285C-AYLR285C-A 171 nt5.87□□□□□ -1.47
SSL2Q00578 MRPS8YMR158W 468 nt5.87□□□□□ -1.47
SSL2Q00578 YNR075C-AYNR075C-A 93 nt5.87□□□□□ -1.47
SSL2Q00578 SSP2YOR242C 1116 nt5.87□□□□□ -1.47
SSL2Q00578 RTG3YBL103C 1461 nt5.87□□□□□ -1.47
SSL2Q00578 IPI3YNL182C 1668 nt5.87□□□□□ -1.47
SSL2Q00578 URA7YBL039C 1740 nt5.87□□□□□ -1.47
SSL2Q00578 MET7YOR241W 1647 nt5.86□□□□□ -1.47
SSL2Q00578 MCH4YOL119C 1506 nt5.86□□□□□ -1.47
SSL2Q00578 YGR022CYGR022C 330 nt5.86□□□□□ -1.47
SSL2Q00578 YGR283CYGR283C 1026 nt5.86□□□□□ -1.47
SSL2Q00578 AIR1YIL079C 1083 nt5.86□□□□□ -1.47
SSL2Q00578 KRE9YJL174W 831 nt5.86□□□□□ -1.47
SSL2Q00578 ERV41YML067C 1059 nt5.86□□□□□ -1.47
SSL2Q00578 MRPL22YNL177C 930 nt5.86□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms