Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL20P78556 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL20P78556 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL20P78556 FOXO3B-201ENST00000395675 1928 ntBASIC18.23■□□□□ 0.51
CCL20P78556 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL20P78556 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCL20P78556 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL20P78556 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL20P78556 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL20P78556 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CCL20P78556 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCL20P78556 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL20P78556 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL20P78556 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.22■□□□□ 0.51
CCL20P78556 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL20P78556 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL20P78556 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL20P78556 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL20P78556 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL20P78556 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL20P78556 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCL20P78556 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.21■□□□□ 0.51
CCL20P78556 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL20P78556 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CCL20P78556 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCL20P78556 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCL20P78556 AC097358.2-201ENST00000607541 1159 ntBASIC18.21■□□□□ 0.51
CCL20P78556 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL20P78556 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.21■□□□□ 0.51
CCL20P78556 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL20P78556 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL20P78556 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL20P78556 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL20P78556 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL20P78556 ANOS2P-203ENST00000472227 1816 ntBASIC18.2■□□□□ 0.5
CCL20P78556 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL20P78556 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL20P78556 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL20P78556 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL20P78556 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL20P78556 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CCL20P78556 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL20P78556 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL20P78556 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL20P78556 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL20P78556 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL20P78556 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL20P78556 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.18■□□□□ 0.5
CCL20P78556 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL20P78556 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL20P78556 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.18■□□□□ 0.5
CCL20P78556 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL20P78556 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCL20P78556 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL20P78556 DUSP8P3-201ENST00000399571 1760 ntBASIC18.17■□□□□ 0.5
CCL20P78556 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCL20P78556 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL20P78556 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCL20P78556 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCL20P78556 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL20P78556 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.17■□□□□ 0.5
CCL20P78556 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL20P78556 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL20P78556 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCL20P78556 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.17■□□□□ 0.5
CCL20P78556 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL20P78556 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL20P78556 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL20P78556 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCL20P78556 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL20P78556 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.16■□□□□ 0.5
CCL20P78556 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL20P78556 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL20P78556 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL20P78556 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCL20P78556 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCL20P78556 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL20P78556 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.15■□□□□ 0.5
CCL20P78556 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL20P78556 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CCL20P78556 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL20P78556 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.15■□□□□ 0.5
CCL20P78556 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL20P78556 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL20P78556 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL20P78556 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL20P78556 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCL20P78556 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.14■□□□□ 0.5
CCL20P78556 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL20P78556 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL20P78556 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.14■□□□□ 0.49
CCL20P78556 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL20P78556 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.14■□□□□ 0.49
CCL20P78556 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CCL20P78556 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
CCL20P78556 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCL20P78556 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCL20P78556 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCL20P78556 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCL20P78556 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms