Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ZC3H6P61129 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
ZC3H6P61129 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ZC3H6P61129 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC31.31■■■□□ 2.6
ZC3H6P61129 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZC3H6P61129 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZC3H6P61129 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
ZC3H6P61129 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.3■■■□□ 2.6
ZC3H6P61129 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
ZC3H6P61129 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZC3H6P61129 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC31.29■■■□□ 2.6
ZC3H6P61129 AC099791.2-201ENST00000605725 427 ntBASIC31.29■■■□□ 2.6
ZC3H6P61129 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ZC3H6P61129 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
ZC3H6P61129 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ZC3H6P61129 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ZC3H6P61129 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ZC3H6P61129 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
ZC3H6P61129 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ZC3H6P61129 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
ZC3H6P61129 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ZC3H6P61129 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC31.27■■■□□ 2.6
ZC3H6P61129 AC008764.7-201ENST00000593779 1081 ntBASIC31.27■■■□□ 2.6
ZC3H6P61129 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ZC3H6P61129 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ZC3H6P61129 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
ZC3H6P61129 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ZC3H6P61129 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
ZC3H6P61129 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ZC3H6P61129 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ZC3H6P61129 AC092171.4-201ENST00000609130 632 ntBASIC31.26■■■□□ 2.59
ZC3H6P61129 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.26■■■□□ 2.59
ZC3H6P61129 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
ZC3H6P61129 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.26■■■□□ 2.59
ZC3H6P61129 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.26■■■□□ 2.59
ZC3H6P61129 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC31.26■■■□□ 2.59
ZC3H6P61129 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.25■■■□□ 2.59
ZC3H6P61129 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.25■■■□□ 2.59
ZC3H6P61129 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZC3H6P61129 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
ZC3H6P61129 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZC3H6P61129 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ZC3H6P61129 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.24■■■□□ 2.59
ZC3H6P61129 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.24■■■□□ 2.59
ZC3H6P61129 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
ZC3H6P61129 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
ZC3H6P61129 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.23■■■□□ 2.59
ZC3H6P61129 AC027682.1-201ENST00000562846 899 ntBASIC31.23■■■□□ 2.59
ZC3H6P61129 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
ZC3H6P61129 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ZC3H6P61129 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ZC3H6P61129 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.22■■■□□ 2.59
ZC3H6P61129 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ZC3H6P61129 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ZC3H6P61129 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC31.21■■■□□ 2.59
ZC3H6P61129 IRS3P-201ENST00000223076 1006 ntBASIC31.21■■■□□ 2.59
ZC3H6P61129 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ZC3H6P61129 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.21■■■□□ 2.59
ZC3H6P61129 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.21■■■□□ 2.59
ZC3H6P61129 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC31.21■■■□□ 2.59
ZC3H6P61129 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC31.21■■■□□ 2.59
ZC3H6P61129 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
ZC3H6P61129 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
ZC3H6P61129 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
ZC3H6P61129 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
ZC3H6P61129 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ZC3H6P61129 JTB-203ENST00000368589 1216 ntTSL 2 BASIC31.2■■■□□ 2.59
ZC3H6P61129 AC099791.1-201ENST00000416440 715 ntBASIC31.2■■■□□ 2.59
ZC3H6P61129 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ZC3H6P61129 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ZC3H6P61129 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.19■■■□□ 2.58
ZC3H6P61129 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.19■■■□□ 2.58
ZC3H6P61129 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.19■■■□□ 2.58
ZC3H6P61129 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.19■■■□□ 2.58
ZC3H6P61129 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.19■■■□□ 2.58
ZC3H6P61129 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ZC3H6P61129 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC31.18■■■□□ 2.58
ZC3H6P61129 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.18■■■□□ 2.58
ZC3H6P61129 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ZC3H6P61129 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
ZC3H6P61129 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ZC3H6P61129 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ZC3H6P61129 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC31.17■■■□□ 2.58
ZC3H6P61129 AC011298.3-201ENST00000615796 283 ntBASIC31.17■■■□□ 2.58
ZC3H6P61129 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC31.17■■■□□ 2.58
ZC3H6P61129 AC131274.2-201ENST00000580697 1507 ntBASIC31.17■■■□□ 2.58
ZC3H6P61129 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ZC3H6P61129 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.16■■■□□ 2.58
ZC3H6P61129 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
ZC3H6P61129 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
ZC3H6P61129 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.15■■■□□ 2.58
ZC3H6P61129 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC31.15■■■□□ 2.58
ZC3H6P61129 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ZC3H6P61129 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ZC3H6P61129 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ZC3H6P61129 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.15■■■□□ 2.58
ZC3H6P61129 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
ZC3H6P61129 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
ZC3H6P61129 AC009102.2-201ENST00000606772 1639 ntBASIC31.14■■■□□ 2.58
ZC3H6P61129 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms