Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBE2NP61088 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.27■□□□□ 0.84
UBE2NP61088 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.27■□□□□ 0.84
UBE2NP61088 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
UBE2NP61088 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2NP61088 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.26■□□□□ 0.83
UBE2NP61088 GUSBP5-201ENST00000418136 578 ntBASIC20.26■□□□□ 0.83
UBE2NP61088 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE2NP61088 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2NP61088 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2NP61088 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2NP61088 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2NP61088 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2NP61088 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2NP61088 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
UBE2NP61088 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2NP61088 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2NP61088 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UBE2NP61088 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2NP61088 AC092028.1-203ENST00000608262 953 ntBASIC20.25■□□□□ 0.83
UBE2NP61088 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2NP61088 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE2NP61088 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE2NP61088 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2NP61088 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2NP61088 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2NP61088 AC138932.3-201ENST00000567634 1902 ntBASIC20.24■□□□□ 0.83
UBE2NP61088 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2NP61088 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2NP61088 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.24■□□□□ 0.83
UBE2NP61088 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.24■□□□□ 0.83
UBE2NP61088 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
UBE2NP61088 TSPY9P-201ENST00000440215 945 ntBASIC20.24■□□□□ 0.83
UBE2NP61088 TSPY11P-201ENST00000442607 1045 ntBASIC20.24■□□□□ 0.83
UBE2NP61088 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.24■□□□□ 0.83
UBE2NP61088 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2NP61088 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2NP61088 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE2NP61088 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.24■□□□□ 0.83
UBE2NP61088 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2NP61088 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2NP61088 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2NP61088 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE2NP61088 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE2NP61088 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
UBE2NP61088 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
UBE2NP61088 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE2NP61088 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE2NP61088 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2NP61088 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2NP61088 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
UBE2NP61088 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE2NP61088 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.22■□□□□ 0.83
UBE2NP61088 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.22■□□□□ 0.83
UBE2NP61088 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UBE2NP61088 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBE2NP61088 HLA-L-211ENST00000482052 1765 ntBASIC20.21■□□□□ 0.83
UBE2NP61088 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.21■□□□□ 0.83
UBE2NP61088 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2NP61088 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE2NP61088 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2NP61088 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2NP61088 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.2■□□□□ 0.82
UBE2NP61088 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2NP61088 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.2■□□□□ 0.82
UBE2NP61088 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.2■□□□□ 0.82
UBE2NP61088 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2NP61088 MTDHP2-201ENST00000601468 714 ntBASIC20.2■□□□□ 0.82
UBE2NP61088 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBE2NP61088 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2NP61088 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.19■□□□□ 0.82
UBE2NP61088 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2NP61088 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UBE2NP61088 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2NP61088 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2NP61088 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2NP61088 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.19■□□□□ 0.82
UBE2NP61088 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.19■□□□□ 0.82
UBE2NP61088 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2NP61088 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.19■□□□□ 0.82
UBE2NP61088 AL022069.1-201ENST00000568025 1636 ntBASIC20.19■□□□□ 0.82
UBE2NP61088 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBE2NP61088 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.19■□□□□ 0.82
UBE2NP61088 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2NP61088 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
UBE2NP61088 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2NP61088 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2NP61088 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBE2NP61088 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.18■□□□□ 0.82
UBE2NP61088 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE2NP61088 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE2NP61088 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE2NP61088 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.18■□□□□ 0.82
UBE2NP61088 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.18■□□□□ 0.82
UBE2NP61088 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.18■□□□□ 0.82
UBE2NP61088 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2NP61088 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBE2NP61088 KRT16P3-201ENST00000439127 1283 ntBASIC20.17■□□□□ 0.82
UBE2NP61088 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBE2NP61088 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms