Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SMPD5-203ENST00000639008 1464 ntBASIC20.03■□□□□ 0.8
CLDN12P56749 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN12P56749 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN12P56749 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN12P56749 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN12P56749 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.02■□□□□ 0.8
CLDN12P56749 MIR3648-2-201ENST00000581792 180 ntBASIC20.02■□□□□ 0.8
CLDN12P56749 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CLDN12P56749 MIR3648-1-201ENST00000615959 180 ntBASIC20.02■□□□□ 0.8
CLDN12P56749 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN12P56749 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLDN12P56749 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.02■□□□□ 0.79
CLDN12P56749 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN12P56749 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN12P56749 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CLDN12P56749 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN12P56749 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CLDN12P56749 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN12P56749 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.01■□□□□ 0.79
CLDN12P56749 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN12P56749 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN12P56749 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLDN12P56749 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20■□□□□ 0.79
CLDN12P56749 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLDN12P56749 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CLDN12P56749 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN12P56749 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLDN12P56749 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN12P56749 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN12P56749 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN12P56749 AC060814.1-201ENST00000554326 538 ntBASIC20■□□□□ 0.79
CLDN12P56749 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20■□□□□ 0.79
CLDN12P56749 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN12P56749 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLDN12P56749 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN12P56749 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20■□□□□ 0.79
CLDN12P56749 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLDN12P56749 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN12P56749 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLDN12P56749 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.99■□□□□ 0.79
CLDN12P56749 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN12P56749 EP400NL-214ENST00000641289 2402 ntBASIC19.99■□□□□ 0.79
CLDN12P56749 FOXO3B-201ENST00000395675 1928 ntBASIC19.99■□□□□ 0.79
CLDN12P56749 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN12P56749 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLDN12P56749 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.99■□□□□ 0.79
CLDN12P56749 AC233723.2-201ENST00000623798 2106 ntBASIC19.99■□□□□ 0.79
CLDN12P56749 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN12P56749 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CLDN12P56749 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN12P56749 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN12P56749 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN12P56749 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN12P56749 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CLDN12P56749 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN12P56749 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN12P56749 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN12P56749 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN12P56749 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLDN12P56749 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN12P56749 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN12P56749 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN12P56749 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN12P56749 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CLDN12P56749 AC016575.1-201ENST00000607026 382 ntBASIC19.97■□□□□ 0.79
CLDN12P56749 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN12P56749 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.97■□□□□ 0.79
CLDN12P56749 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN12P56749 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CLDN12P56749 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN12P56749 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN12P56749 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN12P56749 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN12P56749 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN12P56749 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CLDN12P56749 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN12P56749 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN12P56749 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN12P56749 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN12P56749 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN12P56749 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN12P56749 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN12P56749 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CLDN12P56749 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.95■□□□□ 0.78
CLDN12P56749 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN12P56749 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN12P56749 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CLDN12P56749 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN12P56749 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN12P56749 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN12P56749 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CLDN12P56749 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN12P56749 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN12P56749 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN12P56749 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN12P56749 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN12P56749 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN12P56749 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.94■□□□□ 0.78
CLDN12P56749 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CLDN12P56749 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms