Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.35■■■□□ 2.13
PDE1AP54750 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PDE1AP54750 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.35■■■□□ 2.13
PDE1AP54750 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.35■■■□□ 2.13
PDE1AP54750 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
PDE1AP54750 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PDE1AP54750 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PDE1AP54750 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PDE1AP54750 ABCB10P4-201ENST00000566803 2184 ntBASIC28.35■■■□□ 2.13
PDE1AP54750 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
PDE1AP54750 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDE1AP54750 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDE1AP54750 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.34■■■□□ 2.13
PDE1AP54750 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
PDE1AP54750 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDE1AP54750 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
PDE1AP54750 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
PDE1AP54750 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDE1AP54750 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDE1AP54750 KRT8P33-201ENST00000508125 1423 ntBASIC28.34■■■□□ 2.13
PDE1AP54750 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDE1AP54750 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
PDE1AP54750 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
PDE1AP54750 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
PDE1AP54750 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.32■■■□□ 2.12
PDE1AP54750 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDE1AP54750 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
PDE1AP54750 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
PDE1AP54750 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
PDE1AP54750 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PDE1AP54750 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
PDE1AP54750 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PDE1AP54750 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
PDE1AP54750 MIR4281-201ENST00000580852 62 ntBASIC28.31■■■□□ 2.12
PDE1AP54750 THA1P-201ENST00000590384 1145 ntBASIC28.31■■■□□ 2.12
PDE1AP54750 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
PDE1AP54750 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
PDE1AP54750 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PDE1AP54750 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.3■■■□□ 2.12
PDE1AP54750 AC103724.3-201ENST00000564481 992 ntBASIC28.3■■■□□ 2.12
PDE1AP54750 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PDE1AP54750 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.29■■■□□ 2.12
PDE1AP54750 AF131216.4-201ENST00000638924 1588 ntBASIC28.29■■■□□ 2.12
PDE1AP54750 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.29■■■□□ 2.12
PDE1AP54750 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDE1AP54750 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDE1AP54750 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.29■■■□□ 2.12
PDE1AP54750 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
PDE1AP54750 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDE1AP54750 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
PDE1AP54750 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
PDE1AP54750 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC28.29■■■□□ 2.12
PDE1AP54750 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDE1AP54750 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDE1AP54750 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.28■■■□□ 2.12
PDE1AP54750 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
PDE1AP54750 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PDE1AP54750 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.27■■■□□ 2.12
PDE1AP54750 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.27■■■□□ 2.12
PDE1AP54750 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDE1AP54750 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC28.27■■■□□ 2.12
PDE1AP54750 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PDE1AP54750 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDE1AP54750 AC131274.2-201ENST00000580697 1507 ntBASIC28.27■■■□□ 2.12
PDE1AP54750 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PDE1AP54750 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PDE1AP54750 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC28.26■■■□□ 2.11
PDE1AP54750 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PDE1AP54750 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.26■■■□□ 2.11
PDE1AP54750 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PDE1AP54750 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PDE1AP54750 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PDE1AP54750 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
PDE1AP54750 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC28.25■■■□□ 2.11
PDE1AP54750 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
PDE1AP54750 YBX1P4-201ENST00000392794 808 ntBASIC28.25■■■□□ 2.11
PDE1AP54750 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.25■■■□□ 2.11
PDE1AP54750 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDE1AP54750 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDE1AP54750 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PDE1AP54750 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC28.24■■■□□ 2.11
PDE1AP54750 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PDE1AP54750 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PDE1AP54750 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PDE1AP54750 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE1AP54750 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE1AP54750 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PDE1AP54750 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE1AP54750 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PDE1AP54750 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
PDE1AP54750 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE1AP54750 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.22■■■□□ 2.11
PDE1AP54750 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PDE1AP54750 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
PDE1AP54750 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PDE1AP54750 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PDE1AP54750 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PDE1AP54750 AL161729.1-201ENST00000604104 1402 ntBASIC28.22■■■□□ 2.11
PDE1AP54750 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.21■■■□□ 2.11
PDE1AP54750 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms