Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 SET4YJL105W 1683 nt5.44□□□□□ -1.54
UPF3P48412 LUC7YDL087C 786 nt5.44□□□□□ -1.54
UPF3P48412 YJL215CYJL215C 360 nt5.44□□□□□ -1.54
UPF3P48412 SHP1YBL058W 1272 nt5.44□□□□□ -1.54
UPF3P48412 FKH1YIL131C 1455 nt5.44□□□□□ -1.54
UPF3P48412 MTF2YDL044C 1323 nt5.44□□□□□ -1.54
UPF3P48412 PUF3YLL013C 2640 nt5.43□□□□□ -1.54
UPF3P48412 YDL114WYDL114W 927 nt5.43□□□□□ -1.54
UPF3P48412 GRE3YHR104W 984 nt5.43□□□□□ -1.54
UPF3P48412 YHR214WYHR214W 612 nt5.43□□□□□ -1.54
UPF3P48412 YIL060WYIL060W 435 nt5.43□□□□□ -1.54
UPF3P48412 YAR066WYAR066W 612 nt5.43□□□□□ -1.54
UPF3P48412 PSH1YOL054W 1221 nt5.43□□□□□ -1.54
UPF3P48412 CSG2YBR036C 1233 nt5.43□□□□□ -1.54
UPF3P48412 TFG1YGR186W 2208 nt5.43□□□□□ -1.54
UPF3P48412 RET1YOR207C 3450 nt5.42□□□□□ -1.54
UPF3P48412 BUL1YMR275C 2931 nt5.42□□□□□ -1.54
UPF3P48412 SEC12YNR026C 1416 nt5.42□□□□□ -1.54
UPF3P48412 CWC21YDR482C 408 nt5.42□□□□□ -1.54
UPF3P48412 RRP4YHR069C 1080 nt5.42□□□□□ -1.54
UPF3P48412 SFC1YJR095W 969 nt5.42□□□□□ -1.54
UPF3P48412 HCR1YLR192C 798 nt5.42□□□□□ -1.54
UPF3P48412 CSR1YLR380W 1227 nt5.42□□□□□ -1.54
UPF3P48412 YGP1YNL160W 1065 nt5.42□□□□□ -1.54
UPF3P48412 NAT5YOR253W 531 nt5.42□□□□□ -1.54
UPF3P48412 ARN2YHL047C 1863 nt5.42□□□□□ -1.54
UPF3P48412 RAD53YPL153C 2466 nt5.42□□□□□ -1.54
UPF3P48412 WTM2YOR229W 1404 nt5.41□□□□□ -1.54
UPF3P48412 GSY2YLR258W 2118 nt5.41□□□□□ -1.54
UPF3P48412 YCL065WYCL065W 369 nt5.41□□□□□ -1.54
UPF3P48412 GLE2YER107C 1098 nt5.41□□□□□ -1.54
UPF3P48412 YFR052C-AYFR052C-A 306 nt5.41□□□□□ -1.54
UPF3P48412 YGL262WYGL262W 528 nt5.41□□□□□ -1.54
UPF3P48412 YGR122WYGR122W 1209 nt5.41□□□□□ -1.54
UPF3P48412 YHR193C-AYHR193C-A 375 nt5.41□□□□□ -1.54
UPF3P48412 ISA2YPR067W 558 nt5.41□□□□□ -1.54
UPF3P48412 YPR098CYPR098C 486 nt5.41□□□□□ -1.54
UPF3P48412 TAX4YJL083W 1815 nt5.4□□□□□ -1.54
UPF3P48412 BAP2YBR068C 1830 nt5.4□□□□□ -1.54
UPF3P48412 YRA1YDR381W 681 nt5.4□□□□□ -1.54
UPF3P48412 PFA5YDR459C 1125 nt5.4□□□□□ -1.54
UPF3P48412 HOR7YMR251W-A 180 nt5.4□□□□□ -1.54
UPF3P48412 SNT2YGL131C 4212 nt5.4□□□□□ -1.55
UPF3P48412 PMT5YDL093W 2232 nt5.4□□□□□ -1.55
UPF3P48412 AFT1YGL071W 2073 nt5.39□□□□□ -1.55
UPF3P48412 APL6YGR261C 2430 nt5.39□□□□□ -1.55
UPF3P48412 VCX1YDL128W 1236 nt5.39□□□□□ -1.55
UPF3P48412 HEM3YDL205C 984 nt5.39□□□□□ -1.55
UPF3P48412 YKL223WYKL223W 333 nt5.39□□□□□ -1.55
UPF3P48412 YLR296WYLR296W 327 nt5.39□□□□□ -1.55
UPF3P48412 ROT1YMR200W 771 nt5.39□□□□□ -1.55
UPF3P48412 RPS15YOL040C 429 nt5.39□□□□□ -1.55
UPF3P48412 SMA1YPL027W 738 nt5.39□□□□□ -1.55
UPF3P48412 RGT1YKL038W 3513 nt5.39□□□□□ -1.55
UPF3P48412 DFG5YMR238W 1377 nt5.39□□□□□ -1.55
UPF3P48412 UGA1YGR019W 1416 nt5.39□□□□□ -1.55
UPF3P48412 SSK22YCR073C 3996 nt5.39□□□□□ -1.55
UPF3P48412 YAP1801YHR161C 1914 nt5.38□□□□□ -1.55
UPF3P48412 SEO1YAL067C 1782 nt5.38□□□□□ -1.55
UPF3P48412 PHO86YJL117W 936 nt5.38□□□□□ -1.55
UPF3P48412 RPS0BYLR048W 759 nt5.38□□□□□ -1.55
UPF3P48412 YLR402WYLR402W 192 nt5.38□□□□□ -1.55
UPF3P48412 snR32snR32 188 nt5.38□□□□□ -1.55
UPF3P48412 SRB6YBR253W 366 nt5.38□□□□□ -1.55
UPF3P48412 CLP1YOR250C 1338 nt5.38□□□□□ -1.55
UPF3P48412 RIM101YHL027W 1878 nt5.38□□□□□ -1.55
UPF3P48412 RSM23YGL129C 1353 nt5.38□□□□□ -1.55
UPF3P48412 TMN2YDR107C 2019 nt5.37□□□□□ -1.55
UPF3P48412 MDH3YDL078C 1032 nt5.37□□□□□ -1.55
UPF3P48412 RAI1YGL246C 1164 nt5.37□□□□□ -1.55
UPF3P48412 SAP155YFR040W 3009 nt5.37□□□□□ -1.55
UPF3P48412 DEG1YFL001W 1329 nt5.37□□□□□ -1.55
UPF3P48412 MBP1YDL056W 2502 nt5.37□□□□□ -1.55
UPF3P48412 ADE3YGR204W 2841 nt5.37□□□□□ -1.55
UPF3P48412 UTP18YJL069C 1785 nt5.37□□□□□ -1.55
UPF3P48412 SAS10YDL153C 1833 nt5.37□□□□□ -1.55
UPF3P48412 YCR047W-AYCR047W-A 207 nt5.36□□□□□ -1.55
UPF3P48412 PIC2YER053C 903 nt5.36□□□□□ -1.55
UPF3P48412 BUR6YER159C 429 nt5.36□□□□□ -1.55
UPF3P48412 MOB2YFL034C-B 864 nt5.36□□□□□ -1.55
UPF3P48412 NVJ1YHR195W 966 nt5.36□□□□□ -1.55
UPF3P48412 YLR124WYLR124W 345 nt5.36□□□□□ -1.55
UPF3P48412 YET2YMR040W 483 nt5.36□□□□□ -1.55
UPF3P48412 NCE103YNL036W 666 nt5.36□□□□□ -1.55
UPF3P48412 RFA1YAR007C 1866 nt5.36□□□□□ -1.55
UPF3P48412 SNF3YDL194W 2655 nt5.36□□□□□ -1.55
UPF3P48412 TRK2YKR050W 2670 nt5.36□□□□□ -1.55
UPF3P48412 YDL144CYDL144C 1071 nt5.35□□□□□ -1.55
UPF3P48412 YDL183CYDL183C 963 nt5.35□□□□□ -1.55
UPF3P48412 YDR154CYDR154C 351 nt5.35□□□□□ -1.55
UPF3P48412 PGA2YNL149C 390 nt5.35□□□□□ -1.55
UPF3P48412 YPL073CYPL073C 486 nt5.35□□□□□ -1.55
UPF3P48412 ERV14YGL054C 417 nt5.34□□□□□ -1.55
UPF3P48412 SNO1YMR095C 675 nt5.34□□□□□ -1.55
UPF3P48412 NRG2YBR066C 663 nt5.34□□□□□ -1.55
UPF3P48412 HAP1YLR256W 4509 nt5.34□□□□□ -1.55
UPF3P48412 THI22YPR121W 1719 nt5.34□□□□□ -1.56
UPF3P48412 UTP7YER082C 1665 nt5.34□□□□□ -1.56
UPF3P48412 GAS2YLR343W 1668 nt5.34□□□□□ -1.56
UPF3P48412 NGL2YMR285C 1548 nt5.33□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 116.3 ms