Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 GCV1YDR019C 1203 nt4.48□□□□□ -1.69
CDC40P40968 SUR2YDR297W 1050 nt4.48□□□□□ -1.69
CDC40P40968 YHR218W-AYHR218W-A 318 nt4.48□□□□□ -1.69
CDC40P40968 NOP13YNL175C 1212 nt4.48□□□□□ -1.69
CDC40P40968 CSL4YNL232W 879 nt4.48□□□□□ -1.69
CDC40P40968 PPG1YNR032W 1107 nt4.48□□□□□ -1.69
CDC40P40968 YBL112CYBL112C 318 nt4.48□□□□□ -1.69
CDC40P40968 YPL014WYPL014W 1146 nt4.48□□□□□ -1.69
CDC40P40968 YBR196C-BYBR196C-B 105 nt4.48□□□□□ -1.69
CDC40P40968 SLT2YHR030C 1455 nt4.48□□□□□ -1.69
CDC40P40968 YIL092WYIL092W 1902 nt4.48□□□□□ -1.69
CDC40P40968 MEF2YJL102W 2460 nt4.48□□□□□ -1.69
CDC40P40968 STB2YMR053C 2553 nt4.48□□□□□ -1.69
CDC40P40968 SIR2YDL042C 1689 nt4.48□□□□□ -1.69
CDC40P40968 GPI18YBR004C 1302 nt4.47□□□□□ -1.69
CDC40P40968 HES1YOR237W 1305 nt4.47□□□□□ -1.69
CDC40P40968 RKM2YDR198C 1440 nt4.47□□□□□ -1.69
CDC40P40968 BAP2YBR068C 1830 nt4.47□□□□□ -1.69
CDC40P40968 YDL218WYDL218W 954 nt4.47□□□□□ -1.69
CDC40P40968 SDH4YDR178W 546 nt4.47□□□□□ -1.69
CDC40P40968 YDR187CYDR187C 519 nt4.47□□□□□ -1.69
CDC40P40968 SEC20YDR498C 1152 nt4.47□□□□□ -1.69
CDC40P40968 GRE3YHR104W 984 nt4.47□□□□□ -1.69
CDC40P40968 MPC2YHR162W 390 nt4.47□□□□□ -1.69
CDC40P40968 DJP1YIR004W 1299 nt4.47□□□□□ -1.69
CDC40P40968 YLR184WYLR184W 348 nt4.47□□□□□ -1.69
CDC40P40968 OCA1YNL099C 717 nt4.47□□□□□ -1.69
CDC40P40968 YDR132CYDR132C 1488 nt4.47□□□□□ -1.69
CDC40P40968 CDC1YDR182W 1476 nt4.47□□□□□ -1.69
CDC40P40968 PDI1YCL043C 1569 nt4.47□□□□□ -1.69
CDC40P40968 ADE6YGR061C 4077 nt4.47□□□□□ -1.69
CDC40P40968 ASK10YGR097W 3441 nt4.47□□□□□ -1.69
CDC40P40968 ABF1YKL112W 2196 nt4.47□□□□□ -1.69
CDC40P40968 FOL1YNL256W 2475 nt4.47□□□□□ -1.69
CDC40P40968 RVB2YPL235W 1416 nt4.46□□□□□ -1.69
CDC40P40968 ALG2YGL065C 1512 nt4.46□□□□□ -1.69
CDC40P40968 MPH2YDL247W 1830 nt4.46□□□□□ -1.69
CDC40P40968 NHA1YLR138W 2958 nt4.46□□□□□ -1.7
CDC40P40968 YHR182WYHR182W 2358 nt4.46□□□□□ -1.7
CDC40P40968 UBP9YER098W 2265 nt4.46□□□□□ -1.7
CDC40P40968 YML082WYML082W 1950 nt4.46□□□□□ -1.7
CDC40P40968 HPM1YIL110W 1134 nt4.46□□□□□ -1.7
CDC40P40968 TDH2YJR009C 999 nt4.46□□□□□ -1.7
CDC40P40968 YLR125WYLR125W 411 nt4.46□□□□□ -1.7
CDC40P40968 snR10snR10 245 nt4.46□□□□□ -1.7
CDC40P40968 TPO2YGR138C 1845 nt4.46□□□□□ -1.7
CDC40P40968 DXO1YDR370C 1329 nt4.46□□□□□ -1.7
CDC40P40968 WHI4YDL224C 1950 nt4.45□□□□□ -1.7
CDC40P40968 DAK1YML070W 1755 nt4.45□□□□□ -1.7
CDC40P40968 DOA1YKL213C 2148 nt4.45□□□□□ -1.7
CDC40P40968 SAS10YDL153C 1833 nt4.45□□□□□ -1.7
CDC40P40968 YCR006CYCR006C 474 nt4.45□□□□□ -1.7
CDC40P40968 PCL6YER059W 1263 nt4.45□□□□□ -1.7
CDC40P40968 IRC7YFR055W 1023 nt4.45□□□□□ -1.7
CDC40P40968 LDS1YAL018C 978 nt4.45□□□□□ -1.7
CDC40P40968 MTW1YAL034W-A 870 nt4.45□□□□□ -1.7
CDC40P40968 MDH1YKL085W 1005 nt4.45□□□□□ -1.7
CDC40P40968 RPL3YOR063W 1164 nt4.45□□□□□ -1.7
CDC40P40968 YOR289WYOR289W 756 nt4.45□□□□□ -1.7
CDC40P40968 YPR109WYPR109W 885 nt4.45□□□□□ -1.7
CDC40P40968 MLC2YPR188C 492 nt4.45□□□□□ -1.7
CDC40P40968 HXT4YHR092C 1731 nt4.45□□□□□ -1.7
CDC40P40968 CPS1YJL172W 1731 nt4.45□□□□□ -1.7
CDC40P40968 HIS4YCL030C 2400 nt4.45□□□□□ -1.7
CDC40P40968 BRF1YGR246C 1791 nt4.45□□□□□ -1.7
CDC40P40968 PDR15YDR406W 4590 nt4.45□□□□□ -1.7
CDC40P40968 TRE1YPL176C 2352 nt4.45□□□□□ -1.7
CDC40P40968 GDB1YPR184W 4611 nt4.44□□□□□ -1.7
CDC40P40968 OSW2YLR054C 2175 nt4.44□□□□□ -1.7
CDC40P40968 CDC43YGL155W 1131 nt4.44□□□□□ -1.7
CDC40P40968 MRPL25YGR076C 474 nt4.44□□□□□ -1.7
CDC40P40968 LYS12YIL094C 1116 nt4.44□□□□□ -1.7
CDC40P40968 RPS0BYLR048W 759 nt4.44□□□□□ -1.7
CDC40P40968 YBL044WYBL044W 369 nt4.44□□□□□ -1.7
CDC40P40968 MRPS16YPL013C 366 nt4.44□□□□□ -1.7
CDC40P40968 SRB6YBR253W 366 nt4.44□□□□□ -1.7
CDC40P40968 YPR196WYPR196W 1413 nt4.44□□□□□ -1.7
CDC40P40968 SBE2YDR351W 2595 nt4.44□□□□□ -1.7
CDC40P40968 ZUO1YGR285C 1302 nt4.44□□□□□ -1.7
CDC40P40968 DNF2YDR093W 4839 nt4.43□□□□□ -1.7
CDC40P40968 EKI1YDR147W 1605 nt4.43□□□□□ -1.7
CDC40P40968 PCA1YBR295W 3651 nt4.43□□□□□ -1.7
CDC40P40968 RML2YEL050C 1182 nt4.43□□□□□ -1.7
CDC40P40968 AAD6YFL056C 639 nt4.43□□□□□ -1.7
CDC40P40968 VPS24YKL041W 675 nt4.43□□□□□ -1.7
CDC40P40968 HAP3YBL021C 435 nt4.43□□□□□ -1.7
CDC40P40968 YBL029WYBL029W 1131 nt4.43□□□□□ -1.7
CDC40P40968 SMF3YLR034C 1422 nt4.43□□□□□ -1.7
CDC40P40968 NUP116YMR047C 3342 nt4.43□□□□□ -1.7
CDC40P40968 YDR109CYDR109C 2148 nt4.43□□□□□ -1.7
CDC40P40968 YPL245WYPL245W 1365 nt4.42□□□□□ -1.7
CDC40P40968 BBC1YJL020C 3474 nt4.42□□□□□ -1.7
CDC40P40968 TMN2YDR107C 2019 nt4.42□□□□□ -1.7
CDC40P40968 ATO3YDR384C 828 nt4.42□□□□□ -1.7
CDC40P40968 MSP1YGR028W 1089 nt4.42□□□□□ -1.7
CDC40P40968 SUP19tS(UGA)E 82 nt4.42□□□□□ -1.7
CDC40P40968 SUP17tS(UGA)I 82 nt4.42□□□□□ -1.7
CDC40P40968 SUP16tS(UGA)P 82 nt4.42□□□□□ -1.7
CDC40P40968 YLR157W-EYLR157W-E 165 nt4.42□□□□□ -1.7
CDC40P40968 HCR1YLR192C 798 nt4.42□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms