Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 CDC21YOR074C 915 nt5.05□□□□□ -1.6
TDA11P38854 NSI1YDR026C 1713 nt5.05□□□□□ -1.6
TDA11P38854 TAH18YPR048W 1872 nt5.05□□□□□ -1.6
TDA11P38854 PRP43YGL120C 2304 nt5.05□□□□□ -1.6
TDA11P38854 EMP46YLR080W 1335 nt5.04□□□□□ -1.6
TDA11P38854 GDB1YPR184W 4611 nt5.04□□□□□ -1.6
TDA11P38854 ARP2YDL029W 1176 nt5.04□□□□□ -1.6
TDA11P38854 COG5YNL051W 1212 nt5.04□□□□□ -1.6
TDA11P38854 ECM2YBR065C 1095 nt5.04□□□□□ -1.6
TDA11P38854 YHR045WYHR045W 1683 nt5.04□□□□□ -1.6
TDA11P38854 DNF2YDR093W 4839 nt5.04□□□□□ -1.6
TDA11P38854 VHC1YBR235W 3363 nt5.04□□□□□ -1.6
TDA11P38854 TOS3YGL179C 1683 nt5.03□□□□□ -1.6
TDA11P38854 SWP1YMR149W 861 nt5.03□□□□□ -1.6
TDA11P38854 PPR1YLR014C 2715 nt5.03□□□□□ -1.6
TDA11P38854 NUP1YOR098C 3231 nt5.02□□□□□ -1.61
TDA11P38854 NDC1YML031W 1968 nt5.02□□□□□ -1.61
TDA11P38854 PCA1YBR295W 3651 nt5.02□□□□□ -1.61
TDA11P38854 ROT2YBR229C 2865 nt5.02□□□□□ -1.61
TDA11P38854 ERD1YDR414C 1089 nt5.02□□□□□ -1.61
TDA11P38854 RPL12AYEL054C 498 nt5.02□□□□□ -1.61
TDA11P38854 PGU1YJR153W 1086 nt5.02□□□□□ -1.61
TDA11P38854 MIM2YLR099W-A 264 nt5.02□□□□□ -1.61
TDA11P38854 SEC13YLR208W 894 nt5.02□□□□□ -1.61
TDA11P38854 RPL21BYPL079W 483 nt5.02□□□□□ -1.61
TDA11P38854 PZF1YPR186C 1290 nt5.02□□□□□ -1.61
TDA11P38854 ADE13YLR359W 1449 nt5.02□□□□□ -1.61
TDA11P38854 PRR1YKL116C 1557 nt5.02□□□□□ -1.61
TDA11P38854 ULA1YPL003W 1389 nt5.02□□□□□ -1.61
TDA11P38854 NOP2YNL061W 1857 nt5.01□□□□□ -1.61
TDA11P38854 GPR1YDL035C 2886 nt5.01□□□□□ -1.61
TDA11P38854 MSH1YHR120W 2880 nt5.01□□□□□ -1.61
TDA11P38854 TEA1YOR337W 2280 nt5.01□□□□□ -1.61
TDA11P38854 PEX19YDL065C 1029 nt5.01□□□□□ -1.61
TDA11P38854 GIR2YDR152W 798 nt5.01□□□□□ -1.61
TDA11P38854 TFS1YLR178C 660 nt5.01□□□□□ -1.61
TDA11P38854 MET31YPL038W 534 nt5.01□□□□□ -1.61
TDA11P38854 CAR1YPL111W 1002 nt5.01□□□□□ -1.61
TDA11P38854 PEX32YBR168W 1242 nt5.01□□□□□ -1.61
TDA11P38854 RTT106YNL206C 1368 nt5.01□□□□□ -1.61
TDA11P38854 PSE1YMR308C 3270 nt5.01□□□□□ -1.61
TDA11P38854 VID22YLR373C 2706 nt5.01□□□□□ -1.61
TDA11P38854 KNH1YDL049C 807 nt5□□□□□ -1.61
TDA11P38854 SLC1YDL052C 912 nt5□□□□□ -1.61
TDA11P38854 ROX3YBL093C 663 nt5□□□□□ -1.61
TDA11P38854 YCL021W-AYCL021W-A 378 nt5□□□□□ -1.61
TDA11P38854 MKC7YDR144C 1791 nt5□□□□□ -1.61
TDA11P38854 UBX7YBR273C 1311 nt4.99□□□□□ -1.61
TDA11P38854 CCZ1YBR131W 2115 nt4.99□□□□□ -1.61
TDA11P38854 YCR097W-AYCR097W-A 267 nt4.99□□□□□ -1.61
TDA11P38854 PRM10YJL108C 1152 nt4.99□□□□□ -1.61
TDA11P38854 YJR115WYJR115W 510 nt4.99□□□□□ -1.61
TDA11P38854 PNP1YLR209C 936 nt4.99□□□□□ -1.61
TDA11P38854 ETT1YOR051C 1239 nt4.99□□□□□ -1.61
TDA11P38854 YBR126W-AYBR126W-A 207 nt4.99□□□□□ -1.61
TDA11P38854 YCL041CYCL041C 495 nt4.99□□□□□ -1.61
TDA11P38854 MET7YOR241W 1647 nt4.98□□□□□ -1.61
TDA11P38854 MDR1YGR100W 2853 nt4.98□□□□□ -1.61
TDA11P38854 UTR4YEL038W 684 nt4.98□□□□□ -1.61
TDA11P38854 SPL2YHR136C 447 nt4.98□□□□□ -1.61
TDA11P38854 LDB18YLL049W 540 nt4.98□□□□□ -1.61
TDA11P38854 YLR118CYLR118C 684 nt4.98□□□□□ -1.61
TDA11P38854 APM4YOL062C 1476 nt4.98□□□□□ -1.61
TDA11P38854 FOB1YDR110W 1701 nt4.97□□□□□ -1.61
TDA11P38854 CPS1YJL172W 1731 nt4.97□□□□□ -1.61
TDA11P38854 KAP114YGL241W 3015 nt4.97□□□□□ -1.61
TDA11P38854 tN(GUU)CtN(GUU)C 74 nt4.97□□□□□ -1.61
TDA11P38854 tN(GUU)FtN(GUU)F 74 nt4.97□□□□□ -1.61
TDA11P38854 tN(GUU)GtN(GUU)G 74 nt4.97□□□□□ -1.61
TDA11P38854 tN(GUU)KtN(GUU)K 74 nt4.97□□□□□ -1.61
TDA11P38854 tN(GUU)LtN(GUU)L 74 nt4.97□□□□□ -1.61
TDA11P38854 tN(GUU)N1tN(GUU)N1 74 nt4.97□□□□□ -1.61
TDA11P38854 tN(GUU)N2tN(GUU)N2 74 nt4.97□□□□□ -1.61
TDA11P38854 tN(GUU)O1tN(GUU)O1 74 nt4.97□□□□□ -1.61
TDA11P38854 tN(GUU)O2tN(GUU)O2 74 nt4.97□□□□□ -1.61
TDA11P38854 tN(GUU)PtN(GUU)P 74 nt4.97□□□□□ -1.61
TDA11P38854 NIT2YJL126W 924 nt4.97□□□□□ -1.61
TDA11P38854 PIN2YOR104W 849 nt4.97□□□□□ -1.61
TDA11P38854 MRI1YPR118W 1236 nt4.97□□□□□ -1.61
TDA11P38854 KTR3YBR205W 1215 nt4.97□□□□□ -1.61
TDA11P38854 SEC39YLR440C 2130 nt4.96□□□□□ -1.62
TDA11P38854 COX26YDR119W-A 201 nt4.96□□□□□ -1.62
TDA11P38854 TRS23YDR246W 660 nt4.96□□□□□ -1.62
TDA11P38854 YGR182CYGR182C 354 nt4.96□□□□□ -1.62
TDA11P38854 YMR135W-AYMR135W-A 534 nt4.96□□□□□ -1.62
TDA11P38854 NPT1YOR209C 1290 nt4.96□□□□□ -1.62
TDA11P38854 ENV9YOR246C 993 nt4.96□□□□□ -1.62
TDA11P38854 ETR1YBR026C 1143 nt4.96□□□□□ -1.62
TDA11P38854 YBR230W-AYBR230W-A 201 nt4.96□□□□□ -1.62
TDA11P38854 YCL012CYCL012C 405 nt4.96□□□□□ -1.62
TDA11P38854 ATG18YFR021W 1503 nt4.96□□□□□ -1.62
TDA11P38854 HOS1YPR068C 1413 nt4.96□□□□□ -1.62
TDA11P38854 HXT7YDR342C 1713 nt4.95□□□□□ -1.62
TDA11P38854 HXT6YDR343C 1713 nt4.95□□□□□ -1.62
TDA11P38854 NOB1YOR056C 1380 nt4.95□□□□□ -1.62
TDA11P38854 LHP1YDL051W 828 nt4.95□□□□□ -1.62
TDA11P38854 YEL067CYEL067C 588 nt4.95□□□□□ -1.62
TDA11P38854 VAM7YGL212W 951 nt4.95□□□□□ -1.62
TDA11P38854 HSX1tR(CCU)J 72 nt4.95□□□□□ -1.62
TDA11P38854 MRPL13YKR006C 795 nt4.95□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms