Protein–RNA interactions for Protein: P32971

TNFSF8, Tumor necrosis factor ligand superfamily member 8, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF8P32971 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TNFSF8P32971 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.25■□□□□ 0.83
TNFSF8P32971 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF8P32971 SLC25A24-204ENST00000569674 2357 ntBASIC20.24■□□□□ 0.83
TNFSF8P32971 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF8P32971 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.24■□□□□ 0.83
TNFSF8P32971 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF8P32971 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF8P32971 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF8P32971 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.24■□□□□ 0.83
TNFSF8P32971 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF8P32971 AL137060.1-201ENST00000618151 2648 ntBASIC20.23■□□□□ 0.83
TNFSF8P32971 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF8P32971 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF8P32971 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF8P32971 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF8P32971 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF8P32971 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF8P32971 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF8P32971 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF8P32971 AC097358.2-201ENST00000607541 1159 ntBASIC20.22■□□□□ 0.83
TNFSF8P32971 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF8P32971 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF8P32971 ANOS2P-203ENST00000472227 1816 ntBASIC20.22■□□□□ 0.83
TNFSF8P32971 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF8P32971 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF8P32971 DUSP8P3-201ENST00000399571 1760 ntBASIC20.21■□□□□ 0.83
TNFSF8P32971 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
TNFSF8P32971 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
TNFSF8P32971 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
TNFSF8P32971 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TNFSF8P32971 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TNFSF8P32971 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFSF8P32971 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.2■□□□□ 0.82
TNFSF8P32971 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF8P32971 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF8P32971 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF8P32971 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TNFSF8P32971 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TNFSF8P32971 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF8P32971 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TNFSF8P32971 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.19■□□□□ 0.82
TNFSF8P32971 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF8P32971 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF8P32971 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.19■□□□□ 0.82
TNFSF8P32971 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
TNFSF8P32971 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF8P32971 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF8P32971 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF8P32971 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF8P32971 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.18■□□□□ 0.82
TNFSF8P32971 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF8P32971 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF8P32971 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF8P32971 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFSF8P32971 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFSF8P32971 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF8P32971 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TNFSF8P32971 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.17■□□□□ 0.82
TNFSF8P32971 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF8P32971 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF8P32971 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF8P32971 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
TNFSF8P32971 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF8P32971 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF8P32971 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF8P32971 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF8P32971 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF8P32971 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TNFSF8P32971 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF8P32971 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF8P32971 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.15■□□□□ 0.82
TNFSF8P32971 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF8P32971 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF8P32971 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TNFSF8P32971 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.15■□□□□ 0.82
TNFSF8P32971 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TNFSF8P32971 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFSF8P32971 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TNFSF8P32971 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF8P32971 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TNFSF8P32971 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.14■□□□□ 0.81
TNFSF8P32971 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF8P32971 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF8P32971 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.14■□□□□ 0.81
TNFSF8P32971 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF8P32971 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF8P32971 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF8P32971 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF8P32971 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms