Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.65■■□□□ 1.86
COL11A1P12107 AL031432.3-201ENST00000607698 485 ntBASIC26.65■■□□□ 1.86
COL11A1P12107 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL11A1P12107 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL11A1P12107 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.65■■□□□ 1.86
COL11A1P12107 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.65■■□□□ 1.86
COL11A1P12107 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL11A1P12107 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.65■■□□□ 1.86
COL11A1P12107 ZNRF2P3-201ENST00000424200 374 ntBASIC26.64■■□□□ 1.85
COL11A1P12107 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
COL11A1P12107 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
COL11A1P12107 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.64■■□□□ 1.85
COL11A1P12107 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A1P12107 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A1P12107 AC133561.4-201ENST00000566112 224 ntBASIC26.63■■□□□ 1.85
COL11A1P12107 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.63■■□□□ 1.85
COL11A1P12107 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
COL11A1P12107 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A1P12107 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
COL11A1P12107 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL11A1P12107 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.62■■□□□ 1.85
COL11A1P12107 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
COL11A1P12107 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A1P12107 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A1P12107 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A1P12107 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.62■■□□□ 1.85
COL11A1P12107 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.62■■□□□ 1.85
COL11A1P12107 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A1P12107 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A1P12107 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.62■■□□□ 1.85
COL11A1P12107 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL11A1P12107 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.61■■□□□ 1.85
COL11A1P12107 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.61■■□□□ 1.85
COL11A1P12107 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.61■■□□□ 1.85
COL11A1P12107 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL11A1P12107 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL11A1P12107 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL11A1P12107 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A1P12107 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A1P12107 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.6■■□□□ 1.85
COL11A1P12107 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A1P12107 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
COL11A1P12107 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A1P12107 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.6■■□□□ 1.85
COL11A1P12107 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL11A1P12107 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.6■■□□□ 1.85
COL11A1P12107 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.6■■□□□ 1.85
COL11A1P12107 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.6■■□□□ 1.85
COL11A1P12107 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.6■■□□□ 1.85
COL11A1P12107 AC005703.6-201ENST00000623265 1329 ntBASIC26.59■■□□□ 1.85
COL11A1P12107 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.59■■□□□ 1.85
COL11A1P12107 RARRES2P6-201ENST00000567333 442 ntBASIC26.59■■□□□ 1.85
COL11A1P12107 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
COL11A1P12107 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
COL11A1P12107 UNC93B3-201ENST00000308076 687 ntBASIC26.58■■□□□ 1.84
COL11A1P12107 AC024257.2-201ENST00000549699 147 ntBASIC26.58■■□□□ 1.84
COL11A1P12107 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.57■■□□□ 1.84
COL11A1P12107 AC091060.1-201ENST00000623524 1766 ntBASIC26.57■■□□□ 1.84
COL11A1P12107 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL11A1P12107 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.57■■□□□ 1.84
COL11A1P12107 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.57■■□□□ 1.84
COL11A1P12107 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL11A1P12107 AC005837.3-201ENST00000612163 286 ntBASIC26.57■■□□□ 1.84
COL11A1P12107 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
COL11A1P12107 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.56■■□□□ 1.84
COL11A1P12107 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.56■■□□□ 1.84
COL11A1P12107 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
COL11A1P12107 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL11A1P12107 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL11A1P12107 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
COL11A1P12107 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A1P12107 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A1P12107 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.55■■□□□ 1.84
COL11A1P12107 PBX2P1-201ENST00000493219 1291 ntBASIC26.55■■□□□ 1.84
COL11A1P12107 AC135279.3-201ENST00000610945 1311 ntBASIC26.55■■□□□ 1.84
COL11A1P12107 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL11A1P12107 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL11A1P12107 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
COL11A1P12107 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL11A1P12107 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.54■■□□□ 1.84
COL11A1P12107 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL11A1P12107 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.54■■□□□ 1.84
COL11A1P12107 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.54■■□□□ 1.84
COL11A1P12107 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL11A1P12107 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.53■■□□□ 1.84
COL11A1P12107 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.53■■□□□ 1.84
COL11A1P12107 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL11A1P12107 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL11A1P12107 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.53■■□□□ 1.84
COL11A1P12107 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL11A1P12107 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL11A1P12107 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
COL11A1P12107 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.53■■□□□ 1.84
COL11A1P12107 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.53■■□□□ 1.84
COL11A1P12107 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.53■■□□□ 1.84
COL11A1P12107 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL11A1P12107 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL11A1P12107 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL11A1P12107 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.52■■□□□ 1.84
COL11A1P12107 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms