Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TMEM253P0C7T8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TMEM253P0C7T8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.5■■□□□ 1.51
TMEM253P0C7T8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.5■■□□□ 1.51
TMEM253P0C7T8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TMEM253P0C7T8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TMEM253P0C7T8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.49■■□□□ 1.51
TMEM253P0C7T8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.49■■□□□ 1.51
TMEM253P0C7T8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM253P0C7T8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.49■■□□□ 1.51
TMEM253P0C7T8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.49■■□□□ 1.51
TMEM253P0C7T8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM253P0C7T8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM253P0C7T8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TMEM253P0C7T8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM253P0C7T8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM253P0C7T8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TMEM253P0C7T8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
TMEM253P0C7T8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.47■■□□□ 1.51
TMEM253P0C7T8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM253P0C7T8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TMEM253P0C7T8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TMEM253P0C7T8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TMEM253P0C7T8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.47■■□□□ 1.51
TMEM253P0C7T8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TMEM253P0C7T8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.47■■□□□ 1.51
TMEM253P0C7T8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM253P0C7T8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.46■■□□□ 1.51
TMEM253P0C7T8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.46■■□□□ 1.51
TMEM253P0C7T8 U85056.1-201ENST00000616429 682 ntBASIC24.46■■□□□ 1.51
TMEM253P0C7T8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.46■■□□□ 1.51
TMEM253P0C7T8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM253P0C7T8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM253P0C7T8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TMEM253P0C7T8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.51
TMEM253P0C7T8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM253P0C7T8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM253P0C7T8 LONRF2P2-201ENST00000439212 571 ntBASIC24.45■■□□□ 1.5
TMEM253P0C7T8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
TMEM253P0C7T8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM253P0C7T8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TMEM253P0C7T8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM253P0C7T8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.44■■□□□ 1.5
TMEM253P0C7T8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
TMEM253P0C7T8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
TMEM253P0C7T8 AL161729.1-201ENST00000604104 1402 ntBASIC24.44■■□□□ 1.5
TMEM253P0C7T8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.43■■□□□ 1.5
TMEM253P0C7T8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM253P0C7T8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
TMEM253P0C7T8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.43■■□□□ 1.5
TMEM253P0C7T8 HSD17B1P1-201ENST00000590052 955 ntBASIC24.43■■□□□ 1.5
TMEM253P0C7T8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM253P0C7T8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TMEM253P0C7T8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
TMEM253P0C7T8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM253P0C7T8 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.42■■□□□ 1.5
TMEM253P0C7T8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM253P0C7T8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM253P0C7T8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TMEM253P0C7T8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.42■■□□□ 1.5
TMEM253P0C7T8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TMEM253P0C7T8 AC129492.7-201ENST00000622992 756 ntBASIC24.42■■□□□ 1.5
TMEM253P0C7T8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM253P0C7T8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TMEM253P0C7T8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM253P0C7T8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM253P0C7T8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM253P0C7T8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.41■■□□□ 1.5
TMEM253P0C7T8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.41■■□□□ 1.5
TMEM253P0C7T8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM253P0C7T8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TMEM253P0C7T8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
TMEM253P0C7T8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM253P0C7T8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM253P0C7T8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.4■■□□□ 1.5
TMEM253P0C7T8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.4■■□□□ 1.5
TMEM253P0C7T8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM253P0C7T8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.4■■□□□ 1.5
TMEM253P0C7T8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
TMEM253P0C7T8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TMEM253P0C7T8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMEM253P0C7T8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TMEM253P0C7T8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.39■■□□□ 1.5
TMEM253P0C7T8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TMEM253P0C7T8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TMEM253P0C7T8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.39■■□□□ 1.49
TMEM253P0C7T8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 KRT18P60-201ENST00000312876 1297 ntBASIC24.38■■□□□ 1.49
TMEM253P0C7T8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TMEM253P0C7T8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms