Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
COL5A2P05997 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
COL5A2P05997 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
COL5A2P05997 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
COL5A2P05997 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
COL5A2P05997 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL5A2P05997 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL5A2P05997 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
COL5A2P05997 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL5A2P05997 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL5A2P05997 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL5A2P05997 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC30.96■■■□□ 2.55
COL5A2P05997 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL5A2P05997 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL5A2P05997 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC30.96■■■□□ 2.55
COL5A2P05997 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC30.96■■■□□ 2.55
COL5A2P05997 AC131274.2-201ENST00000580697 1507 ntBASIC30.96■■■□□ 2.55
COL5A2P05997 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.96■■■□□ 2.55
COL5A2P05997 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC30.95■■■□□ 2.55
COL5A2P05997 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
COL5A2P05997 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
COL5A2P05997 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
COL5A2P05997 ERN1-208ENST00000606895 2068 ntBASIC30.95■■■□□ 2.55
COL5A2P05997 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
COL5A2P05997 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
COL5A2P05997 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
COL5A2P05997 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
COL5A2P05997 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC30.95■■■□□ 2.54
COL5A2P05997 AC099791.2-201ENST00000605725 427 ntBASIC30.95■■■□□ 2.54
COL5A2P05997 AL138724.1-201ENST00000606771 1088 ntBASIC30.95■■■□□ 2.54
COL5A2P05997 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
COL5A2P05997 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.94■■■□□ 2.54
COL5A2P05997 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.94■■■□□ 2.54
COL5A2P05997 AC099791.1-201ENST00000416440 715 ntBASIC30.94■■■□□ 2.54
COL5A2P05997 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC30.94■■■□□ 2.54
COL5A2P05997 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
COL5A2P05997 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
COL5A2P05997 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.93■■■□□ 2.54
COL5A2P05997 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
COL5A2P05997 JTB-203ENST00000368589 1216 ntTSL 2 BASIC30.92■■■□□ 2.54
COL5A2P05997 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC30.92■■■□□ 2.54
COL5A2P05997 RHOF-204ENST00000537265 699 ntTSL 2 BASIC30.92■■■□□ 2.54
COL5A2P05997 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC30.92■■■□□ 2.54
COL5A2P05997 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC30.92■■■□□ 2.54
COL5A2P05997 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
COL5A2P05997 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
COL5A2P05997 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC30.91■■■□□ 2.54
COL5A2P05997 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
COL5A2P05997 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
COL5A2P05997 IRS3P-201ENST00000223076 1006 ntBASIC30.9■■■□□ 2.54
COL5A2P05997 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30.9■■■□□ 2.54
COL5A2P05997 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
COL5A2P05997 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL5A2P05997 AC008764.7-201ENST00000593779 1081 ntBASIC30.89■■■□□ 2.54
COL5A2P05997 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
COL5A2P05997 REST-206ENST00000612429 1376 ntTSL 5 BASIC30.89■■■□□ 2.54
COL5A2P05997 REST-207ENST00000616975 1370 ntTSL 5 BASIC30.89■■■□□ 2.54
COL5A2P05997 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.89■■■□□ 2.54
COL5A2P05997 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL5A2P05997 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
COL5A2P05997 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC30.89■■■□□ 2.53
COL5A2P05997 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC30.89■■■□□ 2.53
COL5A2P05997 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
COL5A2P05997 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC30.89■■■□□ 2.53
COL5A2P05997 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC30.89■■■□□ 2.53
COL5A2P05997 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
COL5A2P05997 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC30.88■■■□□ 2.53
COL5A2P05997 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC30.88■■■□□ 2.53
COL5A2P05997 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL5A2P05997 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL5A2P05997 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.88■■■□□ 2.53
COL5A2P05997 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.87■■■□□ 2.53
COL5A2P05997 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL5A2P05997 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
COL5A2P05997 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
COL5A2P05997 AC136469.2-201ENST00000623944 1028 ntBASIC30.87■■■□□ 2.53
COL5A2P05997 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
COL5A2P05997 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.87■■■□□ 2.53
COL5A2P05997 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL5A2P05997 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC30.86■■■□□ 2.53
COL5A2P05997 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC30.86■■■□□ 2.53
COL5A2P05997 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL5A2P05997 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
COL5A2P05997 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL5A2P05997 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL5A2P05997 AC009102.2-201ENST00000606772 1639 ntBASIC30.85■■■□□ 2.53
COL5A2P05997 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL5A2P05997 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL5A2P05997 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
COL5A2P05997 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL5A2P05997 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL5A2P05997 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
COL5A2P05997 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL5A2P05997 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL5A2P05997 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL5A2P05997 C17orf82-201ENST00000623772 1530 ntBASIC30.84■■■□□ 2.53
COL5A2P05997 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL5A2P05997 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.84■■■□□ 2.53
COL5A2P05997 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
COL5A2P05997 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms