Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
MT-ND3P03897 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
MT-ND3P03897 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
MT-ND3P03897 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.4■■□□□ 1.34
MT-ND3P03897 DUX4L18-201ENST00000553347 1267 ntBASIC23.4■■□□□ 1.34
MT-ND3P03897 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MT-ND3P03897 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
MT-ND3P03897 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
MT-ND3P03897 HLA-L-211ENST00000482052 1765 ntBASIC23.4■■□□□ 1.34
MT-ND3P03897 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
MT-ND3P03897 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.39■■□□□ 1.34
MT-ND3P03897 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
MT-ND3P03897 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
MT-ND3P03897 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
MT-ND3P03897 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
MT-ND3P03897 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
MT-ND3P03897 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
MT-ND3P03897 RAP2CP1-202ENST00000605179 643 ntBASIC23.39■■□□□ 1.33
MT-ND3P03897 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
MT-ND3P03897 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
MT-ND3P03897 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
MT-ND3P03897 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.39■■□□□ 1.33
MT-ND3P03897 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
MT-ND3P03897 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
MT-ND3P03897 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MT-ND3P03897 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MT-ND3P03897 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MT-ND3P03897 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
MT-ND3P03897 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND3P03897 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND3P03897 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND3P03897 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND3P03897 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.37■■□□□ 1.33
MT-ND3P03897 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
MT-ND3P03897 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND3P03897 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-ND3P03897 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
MT-ND3P03897 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.36■■□□□ 1.33
MT-ND3P03897 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MT-ND3P03897 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
MT-ND3P03897 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
MT-ND3P03897 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
MT-ND3P03897 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.36■■□□□ 1.33
MT-ND3P03897 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND3P03897 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND3P03897 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND3P03897 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND3P03897 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND3P03897 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND3P03897 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.35■■□□□ 1.33
MT-ND3P03897 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND3P03897 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MT-ND3P03897 RARRES2P1-201ENST00000474487 481 ntBASIC23.35■■□□□ 1.33
MT-ND3P03897 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.35■■□□□ 1.33
MT-ND3P03897 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
MT-ND3P03897 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
MT-ND3P03897 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.34■■□□□ 1.33
MT-ND3P03897 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
MT-ND3P03897 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MT-ND3P03897 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MT-ND3P03897 AC074183.2-201ENST00000623112 922 ntBASIC23.34■■□□□ 1.33
MT-ND3P03897 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
MT-ND3P03897 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
MT-ND3P03897 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.33■■□□□ 1.33
MT-ND3P03897 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.33■■□□□ 1.33
MT-ND3P03897 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.33■■□□□ 1.33
MT-ND3P03897 DUX4L9-201ENST00000449051 1259 ntBASIC23.33■■□□□ 1.33
MT-ND3P03897 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
MT-ND3P03897 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.33■■□□□ 1.32
MT-ND3P03897 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
MT-ND3P03897 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MT-ND3P03897 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
MT-ND3P03897 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.32■■□□□ 1.32
MT-ND3P03897 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.32■■□□□ 1.32
MT-ND3P03897 BHLHE23-202ENST00000612929 1109 ntBASIC23.32■■□□□ 1.32
MT-ND3P03897 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.32■■□□□ 1.32
MT-ND3P03897 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.32■■□□□ 1.32
MT-ND3P03897 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MT-ND3P03897 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MT-ND3P03897 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MT-ND3P03897 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MT-ND3P03897 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MT-ND3P03897 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
MT-ND3P03897 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
MT-ND3P03897 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.31■■□□□ 1.32
MT-ND3P03897 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
MT-ND3P03897 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MT-ND3P03897 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.3■■□□□ 1.32
MT-ND3P03897 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
MT-ND3P03897 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
MT-ND3P03897 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
MT-ND3P03897 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MT-ND3P03897 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.29■■□□□ 1.32
MT-ND3P03897 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
MT-ND3P03897 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
MT-ND3P03897 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.29■■□□□ 1.32
MT-ND3P03897 AC018755.3-202ENST00000596210 929 ntBASIC23.29■■□□□ 1.32
MT-ND3P03897 MIR6765-201ENST00000614092 87 ntBASIC23.29■■□□□ 1.32
MT-ND3P03897 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MT-ND3P03897 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 377.4 ms